Hi Rams,

phenix.match_maps

will superpose maps and models. Totally general: target/moving boxes (unit
cells) and symmetry can be different, gridding can be different too.

I can help off list should you need any assistance!

Pavel


On Wed, Jan 25, 2023 at 6:30 AM Subramanian, Ramaswamy <subra...@purdue.edu>
wrote:

> Hi All,
>
> I have two maps - both cryo-EM.  One with and one without ligand.  I am
> trying to superpose them and I cannot seem to get ChimeraX to work.  I then
> tried VESPER and that also does not work.
>
> The built models superpose very well.
>
> What is the best way to superpose maps.
>
> Thank you.
>
>
> Rams
> subra...@purdue.edu
>
>
>
>
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