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The other possibility you might need to consider is wether or not you have java
running on your machine.
"restraints" is in java, and it seems that ARP/wARP stops just when starting
restraints.
As for the "error" message you're seeing, it is well
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For what it is worth (I'm fairly confident that indeed this is not the cause of
the problem you are seeing, but better checking than missing the point):
The current MacBook Pro also have two GPU, one integrated in the chipset and a
more powerful ded
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I guess the independence is mostly depending on how you select the
reflection that lie in the free-set.
If (from the beginning) you select reflections that are related by the
twin operator to be both in the free-set you keep the "independence"
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Hello Mark;
Could you give us a bit more information, in particular what is the
last step that runs before this one?
Could you send me (or post here) the last 10/20 lines of summary
logfile (the one where the lines you reported are) ?
Hopefully
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Le 26 juin 08 à 18:49, Ethan Merritt a écrit :
On Thursday 26 June 2008 09:36:16 am Serge Cohen wrote:
Please some one tells me if I'm wrong ... but I though that indeed
one
is NOT supposed to measure anomalous difference from reflecti
entions/opinions available on
that ?
Thx, BR
***
Dr. Serge COHEN
GPG Key ID: 0B5CDAEC
N.K.I.
Department of Molecular Carcinogenesis (B8)
Plesmanlaan 121
1066 CX Amsterdam; NL
E-Mail: [EMAIL PROTECTED]
Tel : +31 20 512 2053
***
and Martyn that they told they will give
link for the test dataset to play with most of the ccp4 programs in
the wiki.
(during recent bioxhit ,oulu workshop)
where can i get them, is there any scientist ready to provide.
*******
D
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This is a 10.5 feature : when an application tries to connect to the
X11 window server, X11 is automatically launched (unless it was
already running). Hence in Leopard you can call ccp4i from within
Terminal.app without much more to setup than t
6.0.99 releases.
If this isn't the problem then please do provide more information.
Thanks & best wishes
Peter
Serge Cohen wrote:
Hello;
While using the CCP4 version 6.0.99 during the Bangalore workshop, I
realised that it is not any more possible to "freely" choose the
we
ag is not clear enough.
Cheers;
Serge.
***
Dr. Serge COHEN
GPG Key ID: 0B5CDAEC
N.K.I.
Department of Molecular Carcinogenesis
Plesmanlaan 121
1066 CX Amsterdam; NL
E-Mail: [EMAIL PROTECTED]
Tel : +31 20 512 2053
*
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Dear Francisco;
This looks like a disk access problem. Are you by any chance running
this process from a NFS mounted volume ?
Is this crash reproducible, that is if you "just re-run" the task (in
the CCP4i) will it produce a crash at the exact sa
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Hi;
You might also consider if it is likely that you have statistical
disorder, causing a blur in the DNA. This could be the case if your
binding is not specific, in which case it is possible that DNA is
shifted by a couple of bases (or if your
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Hello Karthik;
Indeed the problem seems to lie in the XML produced by the CCP4 GUI
which is very likely to contain a first (or few initial) line(s)
which makes "loop" to believe it has to deal with NON-XML input while
indeed the input is XML...
advance,
Fred.
***
Dr. Serge COHEN
GPG Key ID: 9CBB58FB
N.K.I.
Department of Molecular Carcinogenesis
Plesmanlaan 121
1066 CX Amsterdam; NL
E-Mail: [EMAIL PROTECTED]
Tel :
eb site and run under X11.
Thanks
Laurie Betts
UNC Chapel Hill
*******
Dr. Serge COHEN
GPG Key ID: 9CBB58FB
N.K.I.
Department of Molecular Carcinogenesis
Plesmanlaan 121
1066 CX Amsterdam; NL
E-Mail: [EMAIL PROTECT
****
Dr. Serge COHEN
GPG Key ID: 9CBB58FB
N.K.I.
Department of Molecular Carcinogenesis
Plesmanlaan 121
1066 CX Amsterdam; NL
E-Mail: [EMAIL PROTECTED]
Tel : +31 20 512 2053
***
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Just to add a few comment on the 32b vs. 64b on intel processor based
computers :
Whereas on most platform the sole advantage of 64b computing is ony
easier handling of large data chunks, the pricture is a bit different
on intel x86 chips. The
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Phil;
If you are using gcc/g++ (and also most likely gfortran) you should
add the option -m32 to the compiler (this will make sure the code is
compiled for 32bits, so you can link it with 32bits libraries).
I don't know how you could do the sam
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Hi Bill;
Given the fact that for laptops apple puts the instructions on how to
add/change the RAM in the user manual. Given also the fact that the
position of the RAM and the disk are far apart it looks like the
person servicing your laptop was
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But then I guess it is not a 'full 6D search' anymore (but a lot more
dimensions), because you want to position all the proteins, right?
Serge.
Le 23 janv. 07 à 04:14, Bart Hazes a écrit :
Hi Filip,
You're right and the same applies if the MR
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Hi Daniel;
Maybe you want to try to perform the refinement of Se and the phase
computation using either SHARP or PHASER which will anyway give you
better HL coefficients than MLPHARE Then you'll get much better
density after solvent flatten
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