[ccp4bb] EMBL Australia Group Leader Positions; Monash University, Melbourne

interests to: positi...@emblaustralia.org. Applications close 2nd November, 2014. Interviews will be held 18-20th February 2015. Cheers James -- Professor James Whisstock Director of the ARC Centre of Excellence for Advanced Molecular Imaging NHMRC Senior Principal Research Fellow Department of

Re: [ccp4bb] very informative - Trends in Data Fabrication

As famously observed by the Yes Minister teamthe dream outcome for any organization: http://www.youtube.com/watch?v=x-5zEb1oS9A&feature=youtube_gdata_player J Sent from my iPhone On 07/04/2012, at 3:16 AM, Patrick Loll wrote: > Ron makes an excellent point. Many institutions devote far mo

Re: [ccp4bb] very informative - Trends in Data Fabrication

Hi I was thinking about the last statement in the Acta editorial - "It is important to note, however, that in neither of these cases was a single frame of data collected. Not one.". This brought me back to the images.. To date there is no "global" acceptance that original diffractiom images

[ccp4bb] Postdoctoral position at Monash University

robotics together with excellent in-house data collection facilities. The University is furthermore situated next door to the Australian synchrotron, a national facility that includes two dedicated crystallography beamlines. -- Professor James Whisstock ARC Federation Fellow Department of

Re: [ccp4bb] off-topic: Discovery Studio software

Hi What specific features are you looking for? Pymol (www.pymol.org) has most standard tools for analysis of protein structure as well as some very basic modeling capacity. Evaluation and academic packages are available. J On Saturday, 19 February 2011, Padmaja Mehta-D'souza wrote: > I have a

[ccp4bb] Two Research fellowship positions

://monash.turborecruit.com.au/job/job_details.cfm?id=503700 Cheers James Whisstock Enquiries about these positions should be sent to: james.whisst...@monash.edu -- Professor James Whisstock ARC Federation Fellow Honorary NHMRC Principal Research Fellow Department of Biochemistry and Molecular Biology Monash

Re: [ccp4bb] Retraction of 12 structures and experimental data deposition

e the non-crystallographers how to look at the structures >>> critically. >>> >>> Ibrahim >>> >> >> >> -- >> Edwin Pozharski, PhD, Assistant Professor >> University of Maryland, Baltimore >> -- &g

Re: [ccp4bb] images

t; http://www.p212121.com/2009/06/04/do-we-need-an-x-ray-diffraction-image-data-bank/ > > > Thanks. > > Sean Seaver -- Professor James Whisstock ARC Federation Fellow Honorary NHMRC Principal Research Fellow Department of Biochemistry and Molecular Biology Monash University, Cl

Re: [ccp4bb] buster-tnt on OSX ?

nstitute for Genomics and Proteomics >> Box 951570 >> Los Angeles, CA 90095 >> >> http://www.jamesstroud.com > > > > Associate Professor Ashley M Buckle > NHMRC Senior Research Fellow > The Department of Biochemistry and Molecular Biology > School of

Re: [ccp4bb] Tag, you're in! Flag, V5, etc

choices of such tags and why would you recommend them? > > Thank you for your time and sharing in advance. > > Yongfu Li -- Professor James Whisstock NHMRC Principal Research Fellow / Monash University Senior Logan fellow Department of Biochemistry and Molecular Biology Monash Unive

Re: [ccp4bb] skin on a drop

Hi Try setting up at 4C can help J > Hi All, > > As we know, there is a skin on a crystallization drop, especially when the > drop contains PEG. Does anyone know what the skin is, a degraded protein ? > How to prevent it ? > > Thanks > > Simon >

Re: [ccp4bb] MR with 40% identical model failed

gt; > 2) Is there any other method to improve the density of the missing > structure? I tried several MR probes of the second barrel fixing the > first > one but all failed. > > > > > > Sorry for the naive question, but this has bothered me for quite some &

Re: [ccp4bb] R-sleep

uld call something like the R-i-didn't-peak. > > > Peter Adrian Meyer wrote: >> This raises a slightly tangential question though - how do we know how >> what obs/param ratio is good enough? -- Professor James Whisstock NHMRC Principal Research Fellow / Monash University Sen

Re: [ccp4bb] "Quick soak" method

>> us. >> >> Derek >> -- >> Derek Logan tel: +46 46 222 1443 >> Associate professor fax: +46 46 222 4692 >> Molecular Biophysicsmob: +46 76 8585 707 >> Lund University >> Box 124, Lund, Sweden >> >> >> --

Re: [ccp4bb] "Quick soak" method

__ >> >> Dr. Uwe Müller >> BESSY-MX group BESSY GmbH >> Albert-Einstein-Straße-15 >> D-12489 Berlin >> Phone: +49-(0)30-6392 4974 >> Fax : +49-(0)30-6392 4975 >> email: [EMAIL PROTECTED] >> url : http://www.psf.bessy.de >> >> BESSY GmbH - Mitglied der Leibniz Gemeinschaft >> Vorsitzender des Aufsichtsrates: Prof. Dr. Dr. h.c. mult Joachim >> Treusch >> Geschäftsführer: Prof. Dr. Dr. h.c. Wolfgang Eberhardt, Prof. >> Dr.Eberhard Jaeschke Sitz Berlin, AG Charlottenburg, HRB 14635 -- Professor James Whisstock NHMRC Principal Research Fellow / Monash University Senior Logan fellow Department of Biochemistry and Molecular Biology Monash University, Clayton Campus, PO Box 13d, VIC, 3800, Australia +613 9905 3747 (Phone) +613 9905 4699 (Fax) +61 418 170 585 (Mobile)

Re: [ccp4bb] worst mr probes

et. al. acta cryst d 60 1229 2004 > Adams, et. al. acta cryst d 55, 181, 1999 > all phaser refs. > > i also got a report of the correct phaser solution with > Z-score=5.2/LLG=49 > - for the uninitiated, a phaser Z-score of 5 to 6 is an 'unlikely' > solution. > > an

Re: [ccp4bb] MS for verification of protein constructs

>> Thanks, >> >> Pat >> -- >> -- >> --- >> Patrick J. Loll, Ph. D. >> (215) 762-7706 >> Associate Professor FAX: (215) >> 762-

Re: [ccp4bb] Off Topic:crystallization in the presence of glycerol

what concentration of glycerol could you use? >> Should I be concerned about this or am I worrying too much? >> Thanks for your input >> Rob >> -- Professor James Whisstock NHMRC Principal Research Fellow / Monash University Senior Logan fellow Department of Biochemistry a

Re: [ccp4bb] crystal with precipitation

filtration,majority of > it > get precipitated,not soluble protein.Is there any method to make the > protein > stable? > I appreciate all the informative suggestions.Thanx in advance and thanx > everybody who has suggested the various options. > Shivesh kumar -- Professor James Wh

Re: [ccp4bb] The importance of USING our validation tools

t;For this example it will be nearly 1 for all resolutions ranges so >> the >> >weights are pretty constant. There is also a contribution from the >> >"experimental" sigma, which in this case seems to be proportional to >> |F| >> >> Originally I ex

Re: [ccp4bb] The importance of USING our validation tools

n observed but they rarely diffract to 2.26A. >>>> >>>> 2) Data Analysis: >>>> The reflection data has been deposited so it can be analysed. >>>> The plots provided by TRUNCATE showing intensity statistic features >>>> are not compatible

Re: [ccp4bb] My flower crystals

> > Thank you for any suggestions. > > Lily Tan -- Professor James Whisstock NHMRC Principal Research Fellow / Monash University Senior Logan fellow Department of Biochemistry and Molecular Biology Monash University, Clayton Campus, PO Box 13d, VIC, 3800, Australia +613 9905 3747 (Phone) +613 9905 4699 (Fax) +61 418 170 585 (Mobile)

Re: [ccp4bb] Data collection of SAD (MAD) data of Copper-containing protein

arching, such as percentage for peaks, it did not > help. > I would love the hear from experienced people about some tricks using > phaser > to solve some difficult MR cases. > > > thanks a lot > Yi -- Professor James Whisstock NHMRC Principal Research Fellow / Monash Univ

Re: [ccp4bb] surface drawings

> solvent accessible surface and thusly only those points falling within > the radius are shown. Seems simple enough, but I haven't quite figured it > out as of yet. > > Thanks in advance for any advise. > Todd -- Professor James Whisstock NHMRC Principal Research Fellow / Mo

Re: [ccp4bb] protease cleavage sites

search Fellow > > Prof Seth Grant Lab / Genes to Cognition > Wellcome Trust Sanger Institute > Hinxton > Cambridge CB10 1SA > > Work Tel: 0044 (0)1223 834244 ext. 7318 > Cell No.: 0044 (0)7870 208280 > === -- Professor

Re: [ccp4bb] RMSD of pairs of atoms?

jan >> >> >> -- >> Jan Lowe email: [EMAIL PROTECTED] >> Laboratory of Molecular Biology phone: +44 (0)1223 252969 >> Medical Research Council fax : +44 (0)1223 213556 >> Hills Road &

Re: [ccp4bb] software to calculate VDW interactions between small molecule and protein

nd recommendations, >> >> Mathias >> >> > Have you tried the MSD Pisa server at the EBI ? It lists all sorts of > information? > > Eleanor -- Professor James Whisstock NHMRC Principal Research Fellow / Monash University Senior Logan fellow Department of Bioche

Re: [ccp4bb] process SeMet labelled data

.ac.uk Tel: >>> (+44) - >>> 1865 - 287561, FAX: (+44) - 1865 - 287547 >> >> Mark J. van Raaij >> Dpto de Bioquímica, Facultad de Farmacia >> and >> Unidad de Rayos X, Edificio CACTUS >> Universidad de Santiago >> 15782 Santiago de Compostela &

Re: [ccp4bb] axis of unit cell change

the above difference in cell dimensions. >> Is there any way I can index my data which would give cell parameters >> of reported structure? >> thanks in advance for any suggestion/comments. >> sam >> >> _

Re: nucleic acid helices

James Whisstock NHMRC Principal Research Fellow / Monash University Senior Logan fellow Department of Biochemistry and Molecular Biology Monash University, Clayton Campus, PO Box 13d, VIC, 3800, Australia. +613 9905 3747 (Phone) +613 9905 4699 (Fax) +61 418 170 585 (Mobile)