Re: [ccp4bb] CCP4i aimless problem, no HKLIN

Thanks Phil, It works fine if I just start with a new fresh ".CCP4" directory, so I guess it is a general CCP4i interface problem. But it is just the aimless program that does this, all other ccp4 progs I use with ccp4i works fine to the best of my knowledge with my old .CCP4 directory. Anythin

Re: [ccp4bb] Create Links in PDB

Thanks to Maisam and Paul (answers below) but I still could not see the links in coot after refining. In coot before refinement, the glucoses are connected, but when I refine, they become disconnected, then if I add a link in coot by doing Extension>Modeling>Add a link, I get disconnected bonds

[ccp4bb] Renumbering RNA

Hello, I have a model, from a collaborator, of a long RNA molecule. The model was generated by splicing together different pieces of RNA structure, so that bases that are paired are close together in the file, while the bases in the linear nucleotide are dispersed throughout the file, but all wit

[ccp4bb] Deadline is approaching: CCP4 crystallographic summer school in USA, at APS, June 24-July 2

Dear Colleagues, We would like to remind you that the application deadline for the annual CCP4/APS Crystallographic Summer School in at the end of this week. The original announcement with some useful details is below. With best wishes, Garib, Ronan and Nukri Ruslan Sanishvili (Nukri) Macromolec

[ccp4bb] GRC on Diffraction Methods: end July 2014

Dear all, We are getting closer and closer to the 2014 edition of my favorite Gordon Research Conference (https://www.grc.org/programs.aspx?year=2014&program=diffrac ) on Diffraction Methods in Structural Biology "Faster, Smaller, Better: Novel Technologies for Diffraction Experiments in Molec

Re: [ccp4bb] CCP4i aimless problem, no HKLIN

Just tested with a clean binary install on a Mac (running 10.8), and it works for me Phil On 8 Apr 2014, at 15:19, Björn Kauppi wrote: > > Hi > > I run latest CCP4 as of today, 6.4.0 update 12 and CCP4i 2.2.1 > When trying to run pointless/aimless from the interface the script generated >

[ccp4bb] CCP4i aimless problem, no HKLIN

Hi I run latest CCP4 as of today, 6.4.0 update 12 and CCP4i 2.2.1 When trying to run pointless/aimless from the interface the script generated show no HKLIN and hence program fails running. If I do “Run&View Com-file” and manually add HKLIN at proper place in the script, it runs fine. This probl

[ccp4bb] Postdoc position in structural biology of ubiquitination at NIMR, London

Dear All, A 3-year postdoc position is available in the Division of Molecular Structure in the group of Katrin Rittinger. The position is aimed at the structural and mechanistic characterisation of proteins that are part of the ubiquitin transfer cascade, with a focus on E3 ubiquitin ligases.