Hello, I have a model, from a collaborator, of a long RNA molecule. The model was generated by splicing together different pieces of RNA structure, so that bases that are paired are close together in the file, while the bases in the linear nucleotide are dispersed throughout the file, but all with the same chain-id:
If these are the rna segments A through K A-B-C-D-E-F-G-H-I-J-K They pair like this: A-C-E-G-I-K | | | | | B-D-F-H-J- and represent a linear sequence: A-C-E-G-I-K-J-H-F-D-B Is there an easy way to renumber this model so that the numbers represent the linear rna sequence? Thanks, Mark -- Yours sincerely, Mark A. White, Ph.D. Associate Professor of Biochemistry and Molecular Biology, Manager, Sealy Center for Structural Biology and Molecular Biophysics Macromolecular X-ray Laboratory, Basic Science Building, Room 6.660 C University of Texas Medical Branch Galveston, TX 77555-0647 Tel. (409) 747-4747 Cell. (281) 734-3614 Fax. (409) 747-1404 mailto://mawh...@utmb.edu http://xray.utmb.edu QQ: "Experience is the teacher of all things." - Julius Caesar
