Re: [Bioc-devel] including package in github

2021-03-06 Thread Kern, Lori
Dependencies have to be actively on CRAN or Bioconductor. I suggest reaching out to the CoxBoost maintainers to see if they will reinstate it in CRAN. Get Outlook for iOS From: xin wwa Sent: Friday, March 5, 2021 9:48:21 PM To: bioc-devel@

Re: [Bioc-devel] Cytoscape installed on bioc builders?

2021-03-06 Thread Kozo Nishida
Hi Catherine, As far as I know, it is impossible. See the comments from Martin Morgan and Paul Shannon below https://github.com/Bioconductor/Contributions/issues/1513#issuecomment-644113558 I am maintaining a package for Cytoscape workflow (called transomics2cytoscape). I test it only on the loca

Re: [Bioc-devel] RegEnrich problems reported in the Multiple platform build/check report for BioC 3.12

2021-03-06 Thread Tao-2, W. (Weiyang)
Dear Lori, Thanks very much for your email. Now I can confirm that the bug has been fixed according to the instruction in your email. Best, Weiyang From: "Kern, Lori" Date: Thursday, 4 March 2021 at 14:14 To: "Tao-2, W. (Weiyang)" , "bioc-devel@r-project.org" Subject: Re: RegEnrich problems