Dear Lori, Thanks very much for your email. Now I can confirm that the bug has been fixed according to the instruction in your email.
Best, Weiyang From: "Kern, Lori" <lori.sheph...@roswellpark.org> Date: Thursday, 4 March 2021 at 14:14 To: "Tao-2, W. (Weiyang)" <w.ta...@umcutrecht.nl>, "bioc-devel@r-project.org" <bioc-devel@r-project.org> Subject: Re: RegEnrich problems reported in the Multiple platform build/check report for BioC 3.12 Please remember there are always two branches of Bioconductor active at one time, a release and a devel branch. Pushing to master and changing to 1.1.1 was on the devel branch and is indeed building cleanly as indicated on the build report: http://bioconductor.org/checkResults/devel/bioc-LATEST/RegEnrich/ The emails you receive are for the release 3.12 branch (in git.bioconductor.org RELEASE_3_12). You need to make changes on the release branch and push forward a 1.0.1 http://bioconductor.org/checkResults/release/bioc-LATEST/RegEnrich/ Please see this helpful git documentation http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/ Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Tao-2, W. (Weiyang) <w.ta...@umcutrecht.nl> Sent: Thursday, March 4, 2021 2:32 AM To: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: [Bioc-devel] FW: RegEnrich problems reported in the Multiple platform build/check report for BioC 3.12 Dear Bioconductor Core Team, I was reported several days ago that my package (RegEnrich stable release version 1.0.0) had a problem in the building step. Then I fixed the bug and bumped the version number to 1.1.1, then I pushed the changes to GitHub and git.bioconductor.org. But today I still got the same report, which seems the report was still based on the version I did not change. Could you please let me know how I can fix this problem? Thank you in advance! Best, Weiyang On 03/03/2021, 19:00, "bbs-nore...@bioconductor.org" <bbs-nore...@bioconductor.org> wrote: [This is an automatically generated email. Please don't reply.] Hi RegEnrich maintainer, According to the Multiple platform build/check report for BioC 3.12, the RegEnrich package has the following problem(s): o ERROR for 'R CMD build' on malbec1. See the details here: https://secure-web.cisco.com/1yf51rtGKt6i4hMsYtjdAgl_p_uoyMfHnSWmpTmf-PELYvEV1taFGCjVCIf_fLv5WadT7b_PyKqinAnUnVoJfGCWgr5xnMe0h3FmaVCcyyLq0yj0tTjrIIOSaDl7qIxbtdxnI9dZUR1Fn4oFeSrTBgKBCLtVL242X0yrPAx0bWfSgWh6GdytDH3yb1bhLRWJ3asXqSvC3qHLMnTrVsNWl74MrI4yg6ZuftLd-ZkWCaU17-Umrg06QwEBN6cxma-ur0XSWr4QntypGNAUlw4KcjYsneWqRR9eUmr5G_XvYbldshgNb3ANZp8r4qBL9n3NV/https%3A%2F%2Fmaster.bioconductor.org%2FcheckResults%2F3.12%2Fbioc-LATEST%2FRegEnrich%2Fmalbec1-buildsrc.html Please take the time to address this by committing and pushing changes to your package at git.bioconductor.org Notes: * This was the status of your package at the time this email was sent to you. Given that the online report is updated daily (in normal conditions) you could see something different when you visit the URL(s) above, especially if you do so several days after you received this email. * It is possible that the problems reported in this report are false positives, either because another package (from CRAN or Bioconductor) breaks your package (if yours depends on it) or because of a Build System problem. 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