[Bioc-devel] ClusterSignificance version number

2018-07-10 Thread Jason Serviss
Hello, I maintain the ClusterSignificance package which recently encountered a build fail. While investigating the problem I noticed that it would seem that there is an issue with the version numbering (quite possibly my fault). Both the master and RELEASE_3_7 branches were bumped to version 1.

Re: [Bioc-devel] ClusterSignificance version number

2018-07-10 Thread Jason Serviss
Lori, Thanks for your quick response! Ok, it was the fact that https://git.bioconductor.org/packages/ClusterSignificance is devel by default that was not clear to me (potentially obvious in hindsight). Thanks for clearing this up! Kind Regards, Jason On 10 Jul 2018, at 11:41, Shepherd, Lori

Re: [Bioc-devel] ClusterSignificance version number

2018-07-10 Thread Shepherd, Lori
There is no problem with the versions. The master branch is the devel branch - and the DESCRIPTION on our git server is 1.9.0 The RELEASE_3_7 branch is the release 3.7 branch - and the DESCRIPTION on our git serve is 1.8.0 When you clone the repository git clone https://git.bioconductor.or

Re: [Bioc-devel] Date for the next release

2018-07-10 Thread Obenchain, Valerie
Hi, We don't have a date yet but it will probably be in October (not necessarily the 31st). Valerie On 07/09/2018 11:34 PM, Samuel Wieczorek wrote: Hi I am the developer of the packages DAPAR and Prostar. I have to plan in advance some work and I would like to synchronise this with the nex

Re: [Bioc-devel] Bioconductor package update

2018-07-10 Thread Ahrim Youn
Dear Martin, The updates that I made to man files are not reflected in the manual of the package (release 3.7) : https://bioconductor.org/packages/release/bioc/manuals/BiFET/man/BiFET.pdf In fact, I found that all files in the release_3_7 are old files that were not updated since January and not

Re: [Bioc-devel] Bioconductor package update

2018-07-10 Thread Martin Morgan
For RELEASE 3.7 you need to push changes to the git.bioconductor.org repository RELEASE_3_7 branch with a version bump to 1.0.1. See http://bioconductor.org/developers/how-to/git/maintain-bioc-only/#optional-merge-changes-to-the-current-release-branch remember that changes to the release branc