Thanks for that link.  In fact, the jmol website crashes my Firefox
3.0.8 with all tabs
just like sage did (or jmol did in a sage notebook).

I suspect it may have to do with which/what/how java(s) are installed
on my Ubuntu.

J

On Apr 9, 8:04 am, Jason Grout <jason-s...@creativetrax.com> wrote:
> William Stein wrote:
> > On Wed, Apr 8, 2009 at 9:30 PM, J Elaych <microsc...@gmail.com> wrote:
> >> I'm using Ubuntu 64 bit on amd2 and running sage-3.4.  I download a
> >> file, "3D graph with points", from sagenb.com and run the cell.  The
> >> interact widgets load and a Jmol splash screen starts and then the
> >> entire browser bails.  Fortunately, I can restart previous session and
> >> recapture my tabs, but of course I have to quickly delete the tab with
> >> the offending worksheet.
>
> >> Here are the messages from the terminal where I started 'sage -
> >> notebook'.
>
> >> 2009-04-08 21:21:48-0700 [HTTPChannel,60,127.0.0.1]
> >> 2009-04-08 21:22:08-0700 [-] cd "/home/jlh/.sage/temp/jlh_desktop/8472/
> >> dir_1"; tar -jxf "/home/jlh/.sage/temp/jlh_desktop/8472/dir_0/3D graph
> >> with points.sws"
> >> tar: 343/worksheet.txt: implausibly old time stamp 1956-04-03 08:55:47
> >> 2009-04-08 21:22:08-0700 [-]
> >> 2009-04-08 21:22:33-0700 [HTTPChannel,65,127.0.0.1] Request error:
> >> Connection to the other side was lost in a non-clean fashion.
> >> 2009-04-08 21:22:56-0700 [HTTPChannel,69,127.0.0.1] Request error:
> >> Connection to the other side was lost in a non-clean fashion.
> >> 2009-04-08 21:23:19-0700 [HTTPChannel,73,127.0.0.1]
> >> 2009-04-08 21:23:43-0700 [HTTPChannel,82,127.0.0.1]
>
> >> The money-lines are the "Request error: ..." which is what prints when
> >> the browser dies.  I searched sage-support for that error message but
> >> didn't find it, so here it is for the next person who searches.
>
> >> Of course, thanks in advance and all.
>
> > There are known problems on some platforms with jmol, which Jason
> > Grout is hopefully tracking down.  
>
> I think I may have helped with some troubleshooting of this in the past,
> but I don't think I was ever seriously working on this.  If someone else
> wants to tackle, go right ahead.  I don't have enough experience with
> Java (especially 64-bit amd systems) to tell what is going on.
>
> However, to start troubleshooting, does the Jmol example work for you
> from the jmol website?  For example, here:
>
> http://jmol.sourceforge.net/demo/atoms/
>
> -Jason
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