On Thu, 06 Feb 2014 11:26:40 shol...@ualberta.ca wrote:
> Hi, it didn't seem like too big a file (otherwise I can use UbuntuOne) so I
> tar'd the log files up and they are attached.
Just the log gsl-1.15.p1.log would have been enough. OK so there is a
configuration and linking problem with your gsl that needs closer
investigation but here are the relevant lines of the log:
/bin/bash ../libtool --mode=install /usr/bin/install -c libgslcblas.la
'/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib'
libtool: install: /usr/bin/install -c .libs/libgslcblas.so.0.0.0
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libgslcblas.so.0.0.0
libtool: install: (cd /home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib && { ln -s -
f libgslcblas.so.0.0.0 libgslcblas.so.0 || { rm -f libgslcblas.so.0 && ln -s
libgslcblas.so.0.0.0 libgslcblas.so.0; }; })
libtool: install: (cd /home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib && { ln -s -
f libgslcblas.so.0.0.0 libgslcblas.so || { rm -f libgslcblas.so && ln -s
libgslcblas.so.0.0.0 libgslcblas.so; }; })
libtool: install: /usr/bin/install -c .libs/libgslcblas.lai
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libgslcblas.la
libtool: install: /usr/bin/install -c .libs/libgslcblas.a
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libgslcblas.a
libtool: install: chmod 644
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libgslcblas.a
libtool: install: ranlib
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libgslcblas.a
libtool: finish:
PATH="/home/sbh/SW/Sage6.1.1/sage-6.1.1/src/bin:/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/bin:/home/sbh/SW/Sage6.1.1/sage-6.1.1/src/bin:/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/bin:/usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/home/sbh/SW/openmpi1.7.3/bin:/usr/lib/java/bin:/usr/lib/java/jre/bin:/home/sbh/SW/BUGSENGPPL1.1/build/bin:/sbin"
ldconfig -n /home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib
/sbin/ldconfig.real: Can't link
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib//home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libsatlas.so
to libsatlas.so
/sbin/ldconfig.real: Can't link
/home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib//home/sbh/SW/Sage6.1.1/sage-6.1.1/local/lib/libtatlas.so
to libtatlas.so
It looks for atlas libraries that a vanilla atlas would ship but not what we
ship. I'll look the gsl spkg. In the meantime extra info that you could
provide: If you have set
export SAGE_KEEP_BUILT_SPKGS=yes
already you should be able to find the config.log from gsl in
build/gsl-1.15 if I am not mistaken. That could hold valuable info.
Francois
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