Thanks Marc! I didn't think the `xcode-select --install` was needed any longer. Did that and all worked well with the `macOS_SDK_headers_for_macOS_10.14.pkg` install.
Many thanks again! tim On Tue, Sep 25, 2018 at 5:36 PM Marc Schwartz <marc_schwa...@me.com> wrote: > Hi Tim, > > Be sure that you are running the latest version of Xcode: > > https://itunes.apple.com/us/app/xcode/id497799835?mt=12 > > and that you also install/re-install the command line tools afterwards: > > xcode-select --install > > With a major macOS version upgrade like this, you should do a fully clean > install of R and afterwards, of XQuartz: > > https://www.xquartz.org > > Regards, > > Marc > > > > On Sep 25, 2018, at 11:59 AM, Tim Bates <timothy.c.ba...@gmail.com> > wrote: > > > > fyi > > > > home$ sudo installer -pkg \ > >> > /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg > \ > >> -target / > > Password: > > installer: Error - the package path specified was invalid: > '/Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg'. > > spearman:OpenMx tim$ > > > > > >> On 25 Sep 2018, at 1:04 pm, Marc Schwartz via R-SIG-Mac < > r-sig-mac@r-project.org> wrote: > >> > >> Thanks to both of you for the pointers on this. > >> > >> I have not used a dark theme since my Fedora days. Still getting used > to it... :-) > >> > >> Regards, > >> > >> Marc Schwartz > >> > >> > >>> On Sep 25, 2018, at 5:55 AM, peter dalgaard <pda...@gmail.com> wrote: > >>> > >>> [Oops. Forgot to copy this back to R-sig-mac, it seems...] > >>> > >>> Thanks, Brian, > >>> > >>> Yes, we have previously learned the hard way that timing R releases > too close to MacOS updates is a bad idea... > >>> > >>> The manual updates haven't made it to CRAN yet, you need to look in > the sources. > >>> > >>> For those who might be curious, but lazy: > >>> > >>>>>>> > >>> As from macOS 10.14 (‘Mojave’) an additional step is needed to install > the headers to /usr/include: from a Terminal run > >>> > >>> sudo installer -pkg \ > >>> > /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg > \ > >>> -target / > >>> > >>> Alternatively, change the include path via > >>> > >>> CPPFLAGS="-isystem > /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include" > >>> <<<< > >>> > >>> > >>> Incidentally, probably unrelated, I discovered that the R-patched > snapshots had stalled since Sep 13 due to an SVN database error. This > should be cleared up now. > >>> > >>> -pd > >>> > >>>> On 25 Sep 2018, at 08:59 , Prof Brian Ripley <rip...@stats.ox.ac.uk> > wrote: > >>>> > >>>> A heads up: > >>>> > >>>> The Mojave update removes /usr/include and (re)installing the Command > Line Tools does not put the standard system headers there. Workarounds are > now described in the R-admin manual for R-devel and R-patched. > >>>> > >>>> -- > >>>> Brian D. Ripley, rip...@stats.ox.ac.uk > >>>> Emeritus Professor of Applied Statistics, University of Oxford > >>>> > >>>> _______________ > <https://maps.google.com/?q=_______________&entry=gmail&source=g> > ________________________________ > >>>> R-SIG-Mac mailing list > >>>> R-SIG-Mac@r-project.org > >>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac > >>> > >>> -- > >>> Peter Dalgaard, Professor, > >>> Center for Statistics, Copenhagen Business School > >>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark > >>> Phone: (+45)38153501 <+45%2038%2015%2035%2001> > >>> Office: A 4.23 > >>> Email: pd....@cbs.dk Priv: pda...@gmail.com > > [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
