Hi Tim, Be sure that you are running the latest version of Xcode:
https://itunes.apple.com/us/app/xcode/id497799835?mt=12 and that you also install/re-install the command line tools afterwards: xcode-select --install With a major macOS version upgrade like this, you should do a fully clean install of R and afterwards, of XQuartz: https://www.xquartz.org Regards, Marc > On Sep 25, 2018, at 11:59 AM, Tim Bates <timothy.c.ba...@gmail.com> wrote: > > fyi > > home$ sudo installer -pkg \ >> /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg >> \ >> -target / > Password: > installer: Error - the package path specified was invalid: > '/Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg'. > spearman:OpenMx tim$ > > >> On 25 Sep 2018, at 1:04 pm, Marc Schwartz via R-SIG-Mac >> <r-sig-mac@r-project.org> wrote: >> >> Thanks to both of you for the pointers on this. >> >> I have not used a dark theme since my Fedora days. Still getting used to >> it... :-) >> >> Regards, >> >> Marc Schwartz >> >> >>> On Sep 25, 2018, at 5:55 AM, peter dalgaard <pda...@gmail.com> wrote: >>> >>> [Oops. Forgot to copy this back to R-sig-mac, it seems...] >>> >>> Thanks, Brian, >>> >>> Yes, we have previously learned the hard way that timing R releases too >>> close to MacOS updates is a bad idea... >>> >>> The manual updates haven't made it to CRAN yet, you need to look in the >>> sources. >>> >>> For those who might be curious, but lazy: >>> >>>>>>> >>> As from macOS 10.14 (‘Mojave’) an additional step is needed to install the >>> headers to /usr/include: from a Terminal run >>> >>> sudo installer -pkg \ >>> /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_macOS_10.14.pkg >>> \ >>> -target / >>> >>> Alternatively, change the include path via >>> >>> CPPFLAGS="-isystem >>> /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include" >>> <<<< >>> >>> >>> Incidentally, probably unrelated, I discovered that the R-patched snapshots >>> had stalled since Sep 13 due to an SVN database error. This should be >>> cleared up now. >>> >>> -pd >>> >>>> On 25 Sep 2018, at 08:59 , Prof Brian Ripley <rip...@stats.ox.ac.uk> wrote: >>>> >>>> A heads up: >>>> >>>> The Mojave update removes /usr/include and (re)installing the Command Line >>>> Tools does not put the standard system headers there. Workarounds are now >>>> described in the R-admin manual for R-devel and R-patched. >>>> >>>> -- >>>> Brian D. Ripley, rip...@stats.ox.ac.uk >>>> Emeritus Professor of Applied Statistics, University of Oxford >>>> >>>> _______________________________________________ >>>> R-SIG-Mac mailing list >>>> R-SIG-Mac@r-project.org >>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>> >>> -- >>> Peter Dalgaard, Professor, >>> Center for Statistics, Copenhagen Business School >>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark >>> Phone: (+45)38153501 >>> Office: A 4.23 >>> Email: pd....@cbs.dk Priv: pda...@gmail.com _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
