Dear Duncan,

Duncan Murdoch wrote on 2020-09-28 21:47:
You're doing a lot of manipulation of the z matrix; I haven't followed all of it, but that's where I'd look for problems.  Generally if you keep your calculation of the z matrix very simple you are better off. For example, once you have xs and ys in the form you want, calculate z as

z <- outer(x,y, function(x,y) ...)

and then plot it using contour(x, y, z, ...)

The only tricky issue here is that the function needs to be vectorized, so if your power.TOST function doesn't accept vectors for CV and theta0, you'll need to put it in a wrapper that does (perhaps using the Vectorize function).

Here I'm lost. power.TOST(theta0, CV, ...) vectorizes properly for theta0 _or_ CV but no _both_. Hence
library(PowerTOST)
power.TOST(theta0 = c(0.9, 0.95, 1), CV = 0.25, n = 28)
and
power.TOST(theta0 = 0.95, CV = c(0.2, 0.25, 0.3), n = 28)
work, whereas
power.TOST(theta0 = c(0.9, 0.95, 1), 0.95, CV = c(0.2, 0.25, 0.3), n = 28)
not. Of note, we will throw an error in the next release if both arguments are vectors.
I tried
f <- function(x, y) {
  power.TOST(theta0 = x, CV = y, n = 28)
}
x <- unique(sort(c(0.95, seq(0.95*0.95, 1, length.out = 28))))
y <- unique(sort(c(0.25, seq(0.25*0.8, 0.25*1.2, length.out = 28))))
Vectorize(f, c("x, y"), SIMPLIFY = "array")
which is obviously not correct.

Helmut

--
Ing. Helmut Schütz
BEBAC – Consultancy Services for
Bioequivalence and Bioavailability Studies
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E helmut.schu...@bebac.at
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