Hi Priya,
You did not follow the logic of the pseudo-code.
The sink("filename"), sink() pair captures whatever output is generated
between the first sink statement and the second sink statement.
You need (possibly) to do:
sink("C://Users//Priya//Desktop//Attractor analysis_all
genes//synaptogenesis//attr.txt")
net <- loadNetwork("C://Users//Priya//Desktop//Attractor analysis_all
genes//synaptogenesis//regulationof_dopamine_signaling_submodule3.txt")
attr <- getAttractors(net, type="asynchronous")
sink()
HTH,
Eric
On Wed, Nov 1, 2017 at 4:10 PM, Priya Arasu <galaxie2...@yahoo.co.in> wrote:
> Hi Eric,
> I tried as you suggested but I could not find the output in the text file
> I created (attr.txt)
>
> net <- loadNetwork("C://Users//Priya//Desktop//Attractor analysis_all
> genes//synaptogenesis//regulationof_dopamine_signaling_submodule3.txt")
>
> sink("C://Users//Priya//Desktop//Attractor analysis_all
> genes//synaptogenesis//attr.txt")
>
>
> sink()
>
> attr <- getAttractors(net, type="asynchronous")
>
>
> Priya
>
>
> On Wednesday, 1 November 2017 6:54 PM, Eric Berger <ericjber...@gmail.com>
> wrote:
>
>
> Some comments:
> 1. sink() does not return a value. There is on point to set attr <-
> sink(...). Just give the command sink("C://....etc")
> 2. to complete the saving to the file you must give a second sink command
> with no argument: sink()
> So your code would be (pseudo-code, not actual code)
>
> sink( "filename" )
> do something that prints output which will be captured by sink
> sink()
>
> HTH,
> Eric
>
>
>
> On Wed, Nov 1, 2017 at 1:32 PM, Priya Arasu via R-help <
> r-help@r-project.org> wrote:
>
> Hi,I want the results to be saved automatically in a output text file
> after the script has finished running.
>
> I used the sink function in the following example, but the results file
> (output.txt) was empty.
>
> net <- loadNetwork("C://Users//Priya/ /Desktop//Attractor analysis_all
> genes//synaptogenesis// regulationof_dopamine_ signaling_submodule3.txt")#
> First I loaded theinput file for which I want to identify attractors
> attr <- sink("C://Users//Priya// Desktop//Attractor analysis_all
> genes//synaptogenesis//output. txt")# used the sink function to save the
> results from attr function
>
> attr <- getAttractors(net, type="asynchronous")# then ran the script for
> identifying attractors
> Is there any function to save the results before setting the script to
> run, so that results are automatically saved in a text file after the
> script has finished running?
>
> Thank youPriya
>
>
>
> [[alternative HTML version deleted]]
>
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