On 5/21/07, William Scott <wgsc...@chemistry.ucsc.edu> wrote:
Is it possible to create a 3D pdf using pymol?
It most certainly is possible, albeit not directly. What type of stereo image are you trying to output? The ray functionality in pymol will output stereo pairs which are meant for either wall-eye or cross-eye display. The default output format is PNG, you can easily output a high-resolution png image and convert it to PDF format afterwards. Open Office will export to PDFs natively, and is free. Using the ghostscript package in linux, this conversion can be automated if you're looking for more than a one-off production. If you're trying to generate anaglyph images (red/blue glasses), it also is possible, but requires some scripting. Feel free to contact me for more details. -Nick
