Hi Surendra,
Just to make sure, are you downloading the "biological unit" PDB from
RCSB? That should be a 5MB gzipped file. The normal PDB for 1c8e does
not contain coordinates for the biological unit (which you need to use
split_states); only a monomer and then info on crystal symmetry. If you
go to a PDB entry at the RCSB and open up the "Download Files" menu,
choose the last option in the list, "Biological Unit Coordinates".
Here is a direct link to the biological unit for 1c8e
http://www.rcsb.org/pdb/files/1c8e.pdb1.gz
The normal PDB is
http://www.rcsb.org/pdb/files/1c8e.pdb.gz
Jacob
surendra negi wrote:
Ji Jacob,
I am trying to produce the results shown in
http://delsci.com/img/1c8e.jpg
http://delsci.com/img/1c8e-screen.jpg
using
split_states 1c8e
delete 1c8e
zoom
spectrum b
hide lines
set cartoon_sampling,3
show cartoon
bg_color grey70
set hash_max, 150
ray
orient
zoom complete=1
ray
script in my linux machine but is is not working and
also giving no error message. It is just showing me
single molecule. Do you have any suggestions.
thanks
surendra
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