On 25 August 2010 12:18, Eiso AB <e...@zobio.com> wrote: > hi Noel, > > eigen2-2.0.5.tar.bz2 > > uname -a > Linux xxx.xxx.net 2.6.18-194.3.1.el5 #1 SMP Fri May 7 01:52:57 EDT 2010 i686 > i686 i386 GNU/Linux
Thanks. > Eiso > ps. shouldn't the reply to field in this list be the list instead of the > sender? The field is set deliberately. Let's not start that discussion here :-) > Noel O'Boyle wrote: >> >> We just discussed this on openbabel-devel. It seems that it's a bug in >> an older version of Eigen. You need to upgrade the version of Eigen >> installed - meanwhile, we need to fix OpenBabel to workaround this >> bug. >> >> Just for the record, what version of Eigen exactly do you have >> installed, and what OS is it? >> >> - Noel >> >> On 25 August 2010 11:16, Eiso AB<e...@zobio.com> wrote: >>> >>> I'm trying to compile the release candidate and getting this: >>> >>> [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/math/align.o >>> [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.o >>> /home/e.ab/software/src/openbabel-2.3.0b2/src/math/align.cpp:28:23: >>> error: >>> Eigen/Dense: No such file or directory >>> /home/e.ab/software/src/openbabel-2.3.0b2/src/math/align.cpp: In member >>> function >>> 'Eigen::Vector3d OpenBabel::OBAlign::MoveToOrigin(Eigen::MatrixXd&)': >>> /home/e.ab/software/src/openbabel-2.3.0b2/src/math/align.cpp:74: error: >>> invalid >>> use of undefined type 'const struct >>> Eigen::PartialRedux<Eigen::Matrix<double, >>> 10000, 10000, 2, 10000, 10000>, 1>' >>> /usr/local/include/eigen2/Eigen/src/Core/util/ForwardDeclarations.h:102: >>> error: >>> declaration of 'const struct Eigen::PartialRedux<Eigen::Matrix<double, >>> 10000, >>> 10000, 2, 10000, 10000>, 1>' >>> >>> [...] finally ends with: >>> >>> /usr/local/include/eigen2/Eigen/src/Core/CwiseUnaryOp.h:75: error: using >>> invalid >>> field 'Eigen::CwiseUnaryOp<UnaryOp, MatrixType>::m_functor' >>> make[2]: *** [src/CMakeFiles/openbabel.dir/math/align.o] Error 1 >>> make[2]: *** Waiting for unfinished jobs.... >>> make[1]: *** [src/CMakeFiles/openbabel.dir/all] Error 2 >>> make: *** [all] Error 2 >>> >>> >>> any idea what's wrong? >>> >>> Eiso >>> >>> >>> Igor Filippov wrote: >>>> >>>> What is the equivalent of the option "--disable-dynamic-modules" in >>>> configure script for cmake? >>>> >>>> Igor >>>> >>>> >>>> On Sat, 2010-08-21 at 15:03 -0400, Noel O'Boyle wrote: >>>>> >>>>> Hello all, >>>>> >>>>> The release of Open Babel 2.3.0 is coming up soon. There have been >>>>> many changes so it would be great to get some feedback on whether the >>>>> current release candidates are working. >>>>> >>>>> These are available at >>>>> >>>>> http://sourceforge.net/projects/openbabel/files/openbabel-snapshots/2010-08-03/openbabel-2.3.0b2-20100803-r3942.tar.gz/download >>>>> for Linux and >>>>> http://sourceforge.net/projects/openbabel/files/openbabel-snapshots/2010-08-18/OpenBabel2.3.0rc2_Windows_Installer.exe/download >>>>> for Windows. >>>>> >>>>> I'm responsible for the new compiling documentation, currently >>>>> available at >>>>> http://baoilleach.webfactional.com/site_media/ob-docs/Installation/install.html#compiling-open-babel. >>>>> If there are any problems with these, please let us know also. >>>>> >>>>> Regards, >>>>> Noel >>>>> >>>>> >>>>> ------------------------------------------------------------------------------ >>>>> This SF.net email is sponsored by >>>>> >>>>> Make an app they can't live without >>>>> Enter the BlackBerry Developer Challenge >>>>> http://p.sf.net/sfu/RIM-dev2dev >>>>> _______________________________________________ >>>>> OpenBabel-discuss mailing list >>>>> OpenBabel-discuss@lists.sourceforge.net >>>>> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss >>>> >>>> >>>> >>>> >>>> ------------------------------------------------------------------------------ >>>> This SF.net email is sponsored by >>>> >>>> Make an app they can't live without >>>> Enter the BlackBerry Developer Challenge >>>> http://p.sf.net/sfu/RIM-dev2dev >>>> _______________________________________________ >>>> OpenBabel-discuss mailing list >>>> OpenBabel-discuss@lists.sourceforge.net >>>> https://lists.sourceforge.net/lists/listinfo/openbabel-discuss >>>> >>> >>> >>> >>> ------------------------------------------------------------------------------ >>> Sell apps to millions through the Intel(R) Atom(Tm) Developer Program >>> Be part of this innovative community and reach millions of netbook users >>> worldwide. 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