On Sat, Jul 11, 2015 at 9:48 PM, Rich Shepard <rshep...@appl-ecosys.com> wrote: > On Sat, 11 Jul 2015, Liviu Andronic wrote: > >> Another way to do this is to keep figure floats, labels and cross-refs >> exclusively in LyX. So the chunk would simply output a graph, and you >> place the chunk within a LyX float (with associated caption and label). >> Then use normal LyX workflow. > > > Might as well keep this in the same thread for posterity's sake. > > The first figure addes in a float allowed the document to be compiled with > pdflatex. When I added a new paragraph with a second figure float > compilation fails but the explicit error is not shown. > Knitr seems to be picky about label names of figure chunks to be unique. Check this. Also, to be safe, keep to one figure per chunk. As for the log, I think some knitr messages aren't in the log per se, but are displayed in the Messages pane. Inspect that for clues.
Liviu > I created a small test file from the document that contains all the knitr > chunks and the two figure floats. Attached is the .lyx file (version 2.1.3), > the /tmp/.../.log file, and the .RData file from the working directory. This > should be enough to replicate the document. I cannot find the error in the > log file; more experienced eyes than mine probably can. It is puzzling that > the one figure worked, but adding an additional figure broke something. > > Because this document will have many figures I need to understand how to > avoid compilation errors as writing continues. > > Thanks, > > Rich -- Do you think you know what math is? http://www.ideasroadshow.com/issues/ian-stewart-2013-08-02 Or what it means to be intelligent? http://www.ideasroadshow.com/issues/john-duncan-2013-08-30 Think again: http://www.ideasroadshow.com/library