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• • Re: [gmx-users] Problem running free energy simulations Michael Shirts
• [gmx-users] Invalid line in coordinate file (grompp tool) Andrew Bostick
  • Re: [gmx-users] Invalid line in coordinate file (grompp tool) Justin Lemkul
  • [gmx-users] Invalid line in coordinate file (grompp tool) Andrew Bostick
  • Re: [gmx-users] Invalid line in coordinate file (grompp tool) Justin Lemkul
• [gmx-users] installing Gromacs4.6.3 with CPMD Collins Nganou
• [gmx-users] g_hydorder Nidhi Katyal
  • [gmx-users] Re: g_hydorder Nidhi Katyal
  • Re: [gmx-users] Re: g_hydorder David van der Spoel
  • Re: [gmx-users] Re: g_hydorder Nidhi Katyal
• [gmx-users] Installing Extended Genbox Tegar Nurwahyu Wijaya
  • Re: [gmx-users] Installing Extended Genbox Mark Abraham
  • Re: [gmx-users] Installing Extended Genbox Tegar Nurwahyu Wijaya
  • Re: [gmx-users] Installing Extended Genbox Justin Lemkul
  • Re: [gmx-users] Installing Extended Genbox Mark Abraham
• [gmx-users] concenating cpt or not required? Xu Dong Huang
  • Re: [gmx-users] concenating cpt or not required? Justin Lemkul
• [gmx-users] Regarding g_membed Venkat Reddy
• [gmx-users] Deuterate organic solvent Jonathan Saboury
  • Re: [gmx-users] Deuterate organic solvent Justin Lemkul
• [gmx-users] Adding hydrogen Abu Naser
  • Re: [gmx-users] Adding hydrogen Justin Lemkul
• [gmx-users] Restarting simulation -s. files? Xu Dong Huang
  • Re: [gmx-users] Restarting simulation -s. files? Justin Lemkul
  • Re: [gmx-users] Restarting simulation -s. files? Xu Dong Huang
  • Re: [gmx-users] Restarting simulation -s. files? Justin Lemkul
  • Re: [gmx-users] Restarting simulation -s. files? Xu Dong Huang
• [gmx-users] Regarding atom numbering in .top and .gro files bipin singh
  • Re: [gmx-users] Regarding atom numbering in .top and .gro files Justin Lemkul
• [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Ehsan Sadeghi
  • Re: [gmx-users] ionomer topolgy Justin Lemkul
• [gmx-users] Re: Re: calculating dihedral properties Anna Marabotti
  • Re: [gmx-users] Re: Re: calculating dihedral properties Justin Lemkul
• [gmx-users] principal component analysis pratibha kapoor
  • Re: [gmx-users] principal component analysis Tsjerk Wassenaar
  • [gmx-users] principal component analysis pratibha kapoor
  • Re: [gmx-users] principal component analysis Tsjerk Wassenaar
• [gmx-users] "Illegal instruction" error from alchemical-gromacs.py Christopher Neale
  • Re: [gmx-users] "Illegal instruction" error from alchemical-gromacs.py Michael Shirts
• [gmx-users] Membrane simulation with OPLS ff. Karthigeyan.Nagarajan
  • [gmx-users] Membrane simulation with OPLS ff. Christopher Neale
  • Re: [gmx-users] Membrane simulation with OPLS ff. Justin Lemkul
  • Re: [gmx-users] Membrane simulation with OPLS ff. Oliver Beckstein
  • RE: [gmx-users] Membrane simulation with OPLS ff. Karthigeyan.Nagarajan
  • [gmx-users] RE: Membrane simulation with OPLS ff. Karthigeyan.Nagarajan
• [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Christopher Neale
  • Re: [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Mark Abraham
  • Re: [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Michael Shirts
  • [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Christopher Neale
  • [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Christopher Neale
  • Re: [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Michael Shirts
  • Re: [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Michael Shirts
  • [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Christopher Neale
  • [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Christopher Neale
  • Re: [gmx-users] segfault when running the alchemistry.org ethanol solvation free energy tutorial Michael Shirts
• [gmx-users] Writing periodic image coordinates. Kavyashree M
  • Re: [gmx-users] Writing periodic image coordinates. Tsjerk Wassenaar
  • Re: [gmx-users] Writing periodic image coordinates. Kavyashree M
• [gmx-users] per mol of what? Ángel Piñeiro
  • Re: [gmx-users] per mol of what? Tsjerk Wassenaar
• [gmx-users] Preprocessor statements grita
  • Re: [gmx-users] Preprocessor statements Dr. Vitaly Chaban
  • Re: [gmx-users] Preprocessor statements Mark Abraham
• [gmx-users] trjcat after trjconv Venkat Reddy
  • Re: [gmx-users] trjcat after trjconv Dr. Vitaly Chaban
  • Re: [gmx-users] trjcat after trjconv Venkat Reddy
  • Re: [gmx-users] trjcat after trjconv Tsjerk Wassenaar
  • Re: [gmx-users] trjcat after trjconv Venkat Reddy
  • Re: [gmx-users] trjcat after trjconv Tsjerk Wassenaar
  • Re: [gmx-users] trjcat after trjconv Venkat Reddy
  • Re: [gmx-users] trjcat after trjconv Tsjerk Wassenaar
  • Re: [gmx-users] trjcat after trjconv Venkat Reddy
• [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Dr. Vitaly Chaban
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Dr. Vitaly Chaban
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Dr. Vitaly Chaban
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Steven Neumann
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
  • Re: [gmx-users] carbon nanotube - ifnite in length ? Justin Lemkul
• [gmx-users] calculating dihedral properties Anna MARABOTTI
  • Re: [gmx-users] calculating dihedral properties Justin Lemkul
• [gmx-users] g_select help rajat desikan
  • Re: [gmx-users] g_select help Teemu Murtola
  • Re: [gmx-users] g_select help rajat desikan
  • Re: [gmx-users] g_select help rajat desikan
  • Re: [gmx-users] g_select help Justin Lemkul
• [gmx-users] POSITION RESTRAIN ERROR MUSYOKA THOMMAS
  • Re: [gmx-users] POSITION RESTRAIN ERROR Justin Lemkul
• [gmx-users] force field for Titanium mohammad agha
  • Re: [gmx-users] force field for Titanium Justin Lemkul
  • Re: [gmx-users] force field for Titanium mohammad agha
• [gmx-users] SPC with amber? Rafael I. Silverman y de la Vega
  • Re: [gmx-users] SPC with amber? Mark Abraham
  • Re: [gmx-users] SPC with amber? Rafael I. Silverman y de la Vega
• [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? Mark Abraham
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • [gmx-users] OPLS/AA + TIP5P, anybody? Christopher Neale
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • [gmx-users] OPLS/AA + TIP5P, anybody? Christopher Neale
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • [gmx-users] OPLS/AA + TIP5P, anybody? Christopher Neale
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • [gmx-users] OPLS/AA + TIP5P, anybody? Christopher Neale
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • [gmx-users] OPLS/AA + TIP5P, anybody? Christopher Neale
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
  • [gmx-users] OPLS/AA + TIP5P, anybody? Christopher Neale
  • Re: [gmx-users] OPLS/AA + TIP5P, anybody? gigo
• [gmx-users] ensemble selection fatemeh ramezani
  • Re: [gmx-users] ensemble selection Justin Lemkul
• [gmx-users] walls combining with the PME and pressure coupling 彭春望
• [gmx-users] Use of walls combining with the PME and pressure coupling (new) p . chunwang
• [gmx-users] periodic surface minimization escajarro
  • [gmx-users] Re: periodic surface minimization escajarro
• [gmx-users] Re:gmx-users Digest, Vol 113, Issue 108 aixintiankong
  • Re: [gmx-users] The charge of cofactor and ligand Justin Lemkul
• [gmx-users] Re: Re: Re: Calculation of binding enthalpy in Jong Wha Lee
• [gmx-users] Re:gmx-users Digest, Vol 113, Issue 106 aixintiankong
  • Re: [gmx-users] The charge of cofactor and ligand Justin Lemkul
• [gmx-users] g_energy Marcelo Vanean
• [gmx-users] RE : gmx-users Digest, Vol 113, Issue 106 ABEL Stephane 175950
• [gmx-users] confusion about implicint solvent Francesco
  • Re: [gmx-users] confusion about implicint solvent Szilárd Páll
  • Re: [gmx-users] confusion about implicint solvent Justin Lemkul
  • Re: [gmx-users] confusion about implicint solvent David van der Spoel
  • Re: [gmx-users] confusion about implicint solvent Francesco
  • Re: [gmx-users] confusion about implicint solvent Mark Abraham
• [gmx-users] The charge of cofactor and ligand aixintiankong
  • Re: [gmx-users] The charge of cofactor and ligand Mark Abraham
• [gmx-users] script to convert the TIP3P water model into TIP4(P)/2005 ABEL Stephane 175950
  • Re: [gmx-users] script to convert the TIP3P water model into TIP4(P)/2005 Justin Lemkul
• [gmx-users] Re: Re: Calculation of binding enthalpy in vacuum Jong Wha Lee
  • Re: [gmx-users] Re: Re: Calculation of binding enthalpy in vacuum Dr. Vitaly Chaban
• [gmx-users] trjconv and "Floating point exception" Dr. Vitaly Chaban
  • Re: [gmx-users] trjconv and "Floating point exception" Justin Lemkul
  • Re: [gmx-users] trjconv and "Floating point exception" Dr. Vitaly Chaban
  • Re: [gmx-users] trjconv and "Floating point exception" Justin Lemkul
• [gmx-users] script to convert the TIP3P water model into TIP4 ABEL Stephane 175950
  • Re: [gmx-users] script to convert the TIP3P water model into TIP4 Justin Lemkul
• [gmx-users] script to convert the TIP3P water model into TIP4P ABEL Stephane 175950
  • Re: [gmx-users] script to convert the TIP3P water model into TIP4P Dr. Vitaly Chaban
• [gmx-users] Calculation of binding enthalpy in vacuum Jong Wha Lee
  • Re: [gmx-users] Calculation of binding enthalpy in vacuum Dr. Vitaly Chaban
• [gmx-users] Re: gmx-users Digest, Vol 113, Issue 101 Jonathan Saboury
  • Re: [gmx-users] Re: gmx-users Digest, Vol 113, Issue 101 Justin Lemkul
• [gmx-users] Funky output trajectory (lines all over the place) Jonathan Saboury
  • Re: [gmx-users] Funky output trajectory (lines all over the place) Dr. Vitaly Chaban
  • Re: [gmx-users] Funky output trajectory (lines all over the place) Mark Abraham
• [gmx-users] energy minimization marzieh dehghan
  • Re: [gmx-users] energy minimization Justin Lemkul
  • Re: [gmx-users] energy minimization Mark Abraham
• Re: [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Justin Lemkul
• [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Nilesh Dhumal
  • Re: [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Justin Lemkul
  • Re: [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Nilesh Dhumal
  • Re: [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Justin Lemkul
  • Re: [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Nilesh Dhumal
  • Re: [gmx-users] grompp Warning: atom name 20 in p2.top and p2.pdb does not match Justin Lemkul
• [gmx-users] Confuse about trjconv tool Caizk
  • Re: [gmx-users] Confuse about trjconv tool Justin Lemkul
• [gmx-users] restarting the crashed run Nidhi Katyal
  • Re: [gmx-users] restarting the crashed run Justin Lemkul
  • Re: [gmx-users] restarting the crashed run Nidhi Katyal
  • Re: [gmx-users] restarting the crashed run Mark Abraham

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