Dear users, I have used grompp command for minimising my system (protein and membrane). I am getting the error:
------------------------------------------------------- Program grompp, VERSION 4.5.1 Source code file: confio.c, line: 744 Fatal error: Invalid line in system.gro for atom 11380: 6.98200 7.63300 7.36400 For more information, please check the GROMACS website at http://www.gromacs.org/Documentation/Errors ------------------------------------------------------- First and end lines of my gro file are as follows: Giving Russians Opium May Alter Current Situation 11380 1DMPC C1 1 4.752 4.493 5.267 1DMPC C2 2 4.770 4.549 5.409 . . . . . 1834SOL OW11378 2.802 5.473 1.849 1834SOL HW111379 2.797 5.377 1.844 1834SOL HW211380 2.812 5.501 1.758 6.98200 7.63300 7.36400 ------------------------------------------------------ Number in second line (11380) is equal to number of atoms in gro file (11380)? How to fix this issue? Kindly make some light on this. Thanks and regards -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
