> Date: Thu, 24 Jan 2013 01:07:04 +0100 > From: Szil?rd P?ll <szilard.p...@cbr.su.se> > Subject: Re: [gmx-users] Problem with gromacs-4.6 compilation on > Debian > To: Discussion list for GROMACS users <gmx-users@gromacs.org> > Message-ID: > <CANnYEw522dfPw5ELOr=xwqyn3xwoeujjpubh4bfc1r7ynhs...@mail.gmail.com> > Content-Type: text/plain; charset=ISO-8859-1 > > Hi all, > > Let me clarify one thing: I highly doubt that the *gcc version* upgrade is > what fixes your the issue, but rather the standard C++ library's version, > as you can see the undefined symbols refer to "GLIBCXX_3.4.15". Usually that is the case but for std::, the symbols are defined in libstdc++, which is part of the gcc package.
$ strings /usr/lib/gcc/i686-pc-linux-gnu/4.6.3/libstdc++.so | grep _M_hook _ZNSt6__norm15_List_node_base7_M_hookEPS0_ _ZNSt15_List_node_base7_M_hookEPS_ _ZNSt8__detail15_List_node_base7_M_hookEPS0_ _ZNSt9__cxx199815_List_node_base7_M_hookEPS0_ Christoph > > Of course, updating the compiler is a perfectly fine solution if you get > the new (enough version of the) standard C++ library by doing so. > > Just wanted to clarify this for users bumping into this issue later. > > Cheers, > > -- > Szilárd -- Christoph Junghans Web: http://www.compphys.de -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
