Dear Gromacs Users!
I'm looking for the model as well as for the pre-paired topology for any kind of GFP protein with the chromophore group covaletnly bonded in the interiour of that protein. Some times ago I've tried to make such models by hands but I've forced with some difficulties with the integration of the chromophore group to the existing GROMOS force field parameter files. In that case I had .itp for the chromophore group made by PRODRG which I've failed to convert to the rtp and integrate to other files in accordance to the http://www.gromacs.org/Documentation/How-tos/Adding_a_Residue_to_a_Force_Field So I'll be very thankfull if any could provide me with such model as well as suitable topology which I could use as the example for preparation of my future models :) Thanks for help James -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
