I use MacroMolecular Builder for all sorts of things, including filling in missing atoms.
Erik 6 jun 2012 kl. 08.59 skrev Javier Cerezo: > There is no GROMACS tool that repairs incomplete structures, but you can find > other programs that can do it. Some of them have been previously posted in > this list (try a search on it). Personally I've used Swiss PDB viewer, which > is useful to add missing atoms. > > Javier > > El 06/06/12 07:42, Seera Suryanarayana escribió: >> >> Dear all gromacs users, >> >> I have 1VZV.pdb file, in that file HIS231 >> has incomplete ring as N atom is missing.Can i add N atom to the .pdb file >> if possible how can i add that atom to .pdb file. >> >> Suryanarayana Seera, >> PhD student, >> India. >> >> > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists ----------------------------------------------- Erik Marklund, PhD Dept. of Cell and Molecular Biology, Uppsala University. Husargatan 3, Box 596, 75124 Uppsala, Sweden phone: +46 18 471 6688 fax: +46 18 511 755 er...@xray.bmc.uu.se http://www2.icm.uu.se/molbio/elflab/index.html
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