On 5/04/2012 4:16 PM, bharat gupta wrote:
Yes , I am using the correct options for dssp. But still I am getting the same error.
What does invoking /usr/local/bin/dsspcmbi say? Mark
On Thu, Apr 5, 2012 at 2:12 PM, Mark Abraham <mark.abra...@anu.edu.au <mailto:mark.abra...@anu.edu.au>> wrote:On 5/04/2012 10:25 AM, bharat gupta wrote: Hi, I am trying to plot the ss content using the do_dssp command , but I am getting the following error :- Failed to execute command: /usr/local/bin/dsspcmbi -na ddldj5Bn ddXN9mH0 > /dev/null 2> /dev/null I am using the DSSPold version. What could be the possible reason for such an error ?? Many of them. Start by making sure you're following the advice of do_dssp -h. Mark-- gmx-users mailing list gmx-users@gromacs.org<mailto:gmx-users@gromacs.org> http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org <mailto:gmx-users-requ...@gromacs.org>. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- Bharat Ph.D. Candidate Room No. : 7202A, 2nd Floor Biomolecular Engineering Laboratory Division of Chemical Engineering and Polymer Science Pusan National University Busan -609735 South Korea Lab phone no. - +82-51-510-3680, +82-51-583-8343 Mobile no. - 010-5818-3680 E-mail : monu46...@yahoo.com <mailto:monu46...@yahoo.com>
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