I suggest you start at http://manual.gromacs.org/current/online/flow.html
There are two other links: 1. http://nmr.chem.uu.nl/~tsjerk/course/molmod/ 2. http://www.dddc.ac.cn/embo04/practicals/9_14_1.htm -- Rodrigo Antonio Faccioli Ph.D Student in Electrical Engineering University of Sao Paulo - USP Engineering School of Sao Carlos - EESC Department of Electrical Engineering - SEL Intelligent System in Structure Bioinformatics http://laips.sel.eesc.usp.br Phone: 55 (16) 3373-9366 Ext 229 Curriculum Lattes - http://lattes.cnpq.br/1025157978990218 Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5 On Mon, May 10, 2010 at 1:57 PM, sonali dhindwal < sonali11dhind...@yahoo.co.in> wrote: > Hello All, > > I am new at MD, and i have started doing it few months ago only. I tried to > run some simulations but taking all the parameters using some tutorials > given online and have not got very good results. > Can someone please help in suggesting what is the best way to learn MD > using Gromacs in terms of manuals and literature, what should be referred to > do a start ? > I am sorry in advance if this query irritates someone, but any kind of help > will be highly appreciable. > Regards > -- > Sonali Dhindwal > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php >
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
