Can you add those options as shown in the output '-fix-ento-wm 
-transfer-base-bfs -fix-vsinus -fix-mca-dura -fix-ga -fix-acj -synthstrip 
-synthseg -synthmorph'?

From: freesurfer-boun...@nmr.mgh.harvard.edu 
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of ???
Sent: Wednesday, December 11, 2024 11:53 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Freesurfer v8.0.0 error


        External Email - Use Caution

Hello FreeSurfer Developers,

I installed freesurfer 8.0.0 successfully but failed to run "recon-all -i *** 
-s *** -all -localGI -qcache" for any subjects. I tried this version 8.0.0beta 
on both macos latest version and ubuntu 22.04, the error was the same as 
follows:

"Adding options -fix-ento-wm -transfer-base-bfs -fix-vsinus -fix-mca-dura 
-fix-ga -fix-acj -synthstrip -synthseg -synthmorph" "ERROR: cannot use ML 
routines"

The command line did not even start anything, thus no log file was generated.

I've searched the list and no similar errors have been reported. Does anyone 
have any thoughts on how to trouble-shoot this one?

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
contains patient information, please contact the Mass General Brigham 
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencrypted e-mail, please notify the sender of 
this message immediately.  Continuing to send or respond to e-mail after 
receiving this message means you understand and accept this risk and wish to 
continue to communicate over unencrypted e-mail. 

Reply via email to