External Email - Use Caution Hi Yujing,
Thanks for the reply. That's correct, I received an annotation file from running 'mris_find_flat_regions -t 0.99 -s 20 <input file> <output file>'. If I'm not mistaken, it seems that mri_annotations2label would output labels which correspond to the same surface as the annotation; I would like to achieve a label file pertaining to the volume of cortex immediately underneath the flat patch of pial surface for which I have an annotation file. I hope this makes sense and any help from anyone is really appreciated. Thanks, Alastair _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
