External Email - Use Caution Hi Lauren,
>From the log it actually looks like you have never run "trac-all -c dmrirc >-path", but "trac-all -c dmrirc -prep" twice. Chiara On May 24, 2023, at 11:51 AM, Lauren Stephens <laure...@stanford.edu<mailto:laure...@stanford.edu>> wrote: External Email - Use Caution Dear Freesurfer Experts, We have been working to run a test data set through tracula and have seemingly had success, however when we ran trac-all -path it completed without error but the files created did not go into a dpath folder. The files that were created went into the dmri and dlabel folders. We are specifically looking for the dpath/merged_avg<nsubj>_<inter>_<intra>.mgz file. We are using Freesurfer 7.3.2 on an iMac Pro running Ventura 13.3.1 in a bash shell. I have attached the dmrirc file. I have also attached the trac-all.log. Thank you for any help you can provide. Lauren Stephens Lauren Stephens, MS Assistant Clinical Research Coordinator Department of Psychiatry and Behavioral Science Stanford University School of Medicine E: laure...@stanford.edu<mailto:laure...@stanford.edu> P: (650)-725-1716 <dmrirc.local><trac-all.log>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://secure-web.cisco.com/1N8LxOQf5wcRILSfz26EccLly0rlSHdnpM0BynuaAa_m25v-Tggwjb8U2go_ukkzT6s1O1h70rgkD_3EHSpQkHuTqoifBxdFCccXgs9hEabZjPITK9Vilsr7DuhfCpOnDNWHHZXjThM1CuAYS-mdFKSGOPTgcnJPQ0wpu1zMw17DjcqoPFNKrI-Liu9OaWu0FdSfMyACTQmib-HC5pmSbpvO9ihPfVwRLhuj2m9FTQSQObaO1gtMf0oLf8Th9HFEXdkJbKFYRI7d-LwBkrFA_yg/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
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