I think so, but it may be that later stages (like surface deformation) can be used to refine the wm.seg.mgz so it is more accurate.
Cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Mostafa Fakhri Sent: Wednesday, September 7, 2022 2:53 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] problem with autorecon2-cp External Email - Use Caution Hi Bruce, It works.Thank you so much. Actually I need just rawavrg.mgz and wm.seg.mgz, I think using autorecon2 is quick way to to produce these images. Is this correct? Mostafa
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