External Email - Use Caution Hi Bruce,
Thank you for the response! Which freesurfer command do I need to run with -t 0? Best regards, Sam On Sat, Aug 27, 2022 at 3:44 AM Fischl, Bruce <bfis...@mgh.harvard.edu> wrote: > I don’t think we ever write out the mid-sagittal plane, but we do compute > it when we segment the callosum. You could set the lateral distance to > extend the callosum to 0 with -t 0 and then it will only label cc voxels in > the mid-sagittal plane > > > > *From:* freesurfer-boun...@nmr.mgh.harvard.edu < > freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of *Sam W > *Sent:* Friday, August 26, 2022 8:37 PM > *To:* Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> > *Subject:* [Freesurfer] midsagittal mask > > > > * External Email - Use Caution * > > Hello! > > I ran recon-all on my subject, is it possible to create a mask of the > midsagittal plane using freesurfer? > > > > Best regards, > > Sam > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1nVcXuwbIwk06A1lHk0N_nOrnwAR0obzPfaAjxFPdY7z7HlBGkI5eOV-VaiHQpwXro56Y4HuuUuS4SPVMjizYwJfDwHv8R8QZO_ltOHfSRTPM08Ei9n76WPwB6nsgL_ZV_VwZtDSCoc55ifDAfFWYXzsFrsilejKzlvQlsv4je9b6DKoGegdTf9ZdMUYSTIdmqaGq2DIwPVH2SF8Czg3PzurGOUcE7H69MAtEPT86sSyODSkJAZoJaNSRjnuZ4xa1R4mu_ygt7GfTEshmVTYs-I7Z-kEPjbJbkrKaOMH4voRsm3wxFf_g9GyuUa-lM6ws/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > The information in this e-mail is intended only for the person to whom it > is addressed. If you believe this e-mail was sent to you in error and the > e-mail contains patient information, please contact the Mass General > Brigham Compliance HelpLine at > https://secure-web.cisco.com/10zuDtzNzUgDR5MQHn973zoHV0GRGvTmb1L487UtSD_wM7soXpFw6VCLLU1UoSlliY85j9Ilv0qm2E28N0CB2tTlVfQz5FNhh1HRLnRiqU14Pq5a6uiu9108U0bQ84vzkNtjwa7sjad-JamJPkHbV5CHPWqqZUV_qZ-iWz0rh0uzM2JxYtgPV4aX_vn8eFMsMt53QB-coyuhOnDqd1QY2gzhXLemT5Y2Do4qZYzy1UGaF3ZrtRFV-zNe6o6Nxz9MA6B-dTFgmM4Oorl8EOZSH9yy1nf9eyLfiN3_ovlxbiW3ph-E8ZCcJDupLTJiKw9sL/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline > < > https://secure-web.cisco.com/10zuDtzNzUgDR5MQHn973zoHV0GRGvTmb1L487UtSD_wM7soXpFw6VCLLU1UoSlliY85j9Ilv0qm2E28N0CB2tTlVfQz5FNhh1HRLnRiqU14Pq5a6uiu9108U0bQ84vzkNtjwa7sjad-JamJPkHbV5CHPWqqZUV_qZ-iWz0rh0uzM2JxYtgPV4aX_vn8eFMsMt53QB-coyuhOnDqd1QY2gzhXLemT5Y2Do4qZYzy1UGaF3ZrtRFV-zNe6o6Nxz9MA6B-dTFgmM4Oorl8EOZSH9yy1nf9eyLfiN3_ovlxbiW3ph-E8ZCcJDupLTJiKw9sL/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> > . >
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