Hi Rahul If you have run the qcache stuff you can just run mri_average on all the individual subject thickness files since they are all mapped to fsaverage, then display them on fsaverage
Cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Yash Patel Sent: Saturday, January 15, 2022 6:44 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Visualization of data External Email - Use Caution Hi Rahul, If you fancy R… see blow MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://cran.r-project.org/web/packages/fsbrain/vignettes/fsbrain.html<https://secure-web.cisco.com/1FPX7O9IgSORhmIPCQmiRAvZzh4mEwsrGRjbf0-doAdnyfrKWKXd221MkQ7karsqjkCO1koK0LC4I5I894FgoTbDMMKgFinQ3V8wRijN1X_O0I8fhof7jXVwFYPOu2mztQj5Cq5CeOBsJzBQHIjZzSl3U3500dAjs2yrY7s0xX3N67iXff3MStTiyrQfP0WZxfx7wcr9N0xEYfmO7L8rg1rbRBWLuFTS07_VfraZWi2RxNr0ZxobxBiHxCjLjaCnPjEX7pmTD62km4blkh0PzBD5w5a9QQnQzRAAE4VLRlo7Y_laYJGj-r2NN8ioKuigg/https%3A%2F%2Fcran.r-project.org%2Fweb%2Fpackages%2Ffsbrain%2Fvignettes%2Ffsbrain.html> Cheers Yash Sent from my iPhone On Jan 14, 2022, at 3:36 PM, Paul, Rahul <rpa...@mgh.harvard.edu<mailto:rpa...@mgh.harvard.edu>> wrote: Hi FreeSurfer experts, I have a dataset of 60 patients. Is there a way to visualize the average cortical thickness/area for my dataset? Thank you in advance. Rahul _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://www.massgeneralbrigham.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
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