External Email - Use Caution Dear Freesurfer experts,
I used t2 image as input in subjects that have already been processed without them following the instructions of the website. Although pial surface segmentation has improved there is still some error. After edit the brainmask.mgz file in Freeview (recon edit option), what command should I use to correct the pial surfaces obtained after the -T2pial flag? I tried to use the -autorecon-pial command to correct the edits but I think that this command only takes into account the T1, is that right? Best regards,
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