Hi Jorgan do you have read permission for that file/directory? It looks like not
cheers Bruce On Mon, 4 Feb 2019, Jordan Fowler wrote:
External Email - Use Caution Here is the message displayed: Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /Applications/freesurfer FSFAST_HOME /Applications/freesurfer/fsfast FSF_OUTPUT_FORMAT nii.gz SUBJECTS_DIR /Applications/freesurfer/subjects MNI_DIR /Applications/freesurfer/mni Jordans-MacBook-Air-2:~ jordanfowler$ > cp $FREESURFER_HOME/subjects/sample-001.mgz . -bash: /Applications/freesurfer/subjects/sample-001.mgz: Permission denied
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