External Email - Use Caution hey, is there any update regarding the release of the FreeSurfer 6 HCP-compatible version?
cheers, Shachar On Mon, 14 Jan 2019 at 14:58 Shachar Gal <gal.shac...@gmail.com> wrote: > thanks, > hope it'll work > anyway, looking forward for the version 6 release > > cheers, > Shachar > > On Mon, 14 Jan 2019 at 14:08 Glasser, Matthew <glass...@wustl.edu> wrote: > >> Ubuntu 14.04 should still work. >> >> Matt. >> >> From: Shachar Gal <gal.shac...@gmail.com> >> Date: Monday, January 14, 2019 at 5:43 AM >> To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>, Matt >> Glasser <glass...@wustl.edu>, Ido Tavor <idota...@gmail.com> >> Subject: Re: problem using recon-all >> >> if the problem is with the versions, maybe downgrading my OS for now will >> do the trick? do you happen know what is the latest ubuntu that is >> compatible with the 5.3-HCP version? >> does this also occur in centOS? >> >> thanks >> >> On Sun, 13 Jan 2019 at 17:46 Shachar Gal <gal.shac...@gmail.com> wrote: >> >>> hello, >>> I using the HCP FreeSurfer Pipeline (using FreeSurfer 5.3-HCP version) >>> on ubuntu, and I encounter this error (copying from the recon-all.log) >>> _______________________________________ >>> #@# Talairach Sun Jan 13 17:35:07 IST 2019 >>> /home/shachar/piano_hcp/102/102/mri >>> >>> mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale >>> --i orig.mgz --o orig_nu.mgz >>> >>> Linux maestro 4.15.0-43-generic #46-Ubuntu SMP Thu Dec 6 14:45:28 UTC >>> 2018 x86_64 x86_64 x86_64 GNU/Linux >>> >>> recon-all -s 102 exited with ERRORS at Sun Jan 13 17:35:08 IST 2019 >>> _______________________________________ >>> >>> i'm a bit confused by the lack of error descriptions, and would >>> appreciate any leads for solving it :) >>> >>> Shachar >>> >> >> ------------------------------ >> >> The materials in this message are private and may contain Protected >> Healthcare Information or other information of a sensitive nature. If you >> are not the intended recipient, be advised that any unauthorized use, >> disclosure, copying or the taking of any action in reliance on the contents >> of this information is strictly prohibited. If you have received this email >> in error, please immediately notify the sender via telephone or return mail. >> >
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