External Email - Use Caution Thanks for your reply doctor. Actually I want to access Desikan K. Atlas coordinates as x, y, z. (each regions. for example caudalanteriorcingulate).
In that case, one expert said that ; the closest to what you want is probably $FREESURFER_HOME/subjects/fsaverage/surf/lh.aparc.label. You can open it with a text editor. Then you should cross-check with $FREESURFER_HOME/subjects/fsaverage/surf/lh.aparc.annot for the actual labels of those vertices. The .annot file can be opened in Matlab with the read_annotation command from FreeSurfer. What do you recommend? Ece ________________________________ Gönderen: Bruce Fischl <fis...@nmr.mgh.harvard.edu> adına freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> Gönderildi: 5 Kasım 2018 Pazartesi 20:18 Kime: Freesurfer support list Konu: Re: [Freesurfer] İlt: Desikan Atlas in volume space Hi Ece for a given subject the Desikan parcellation is sampled into the volume alread in the file aparc+aseg.mgz in the subject's mri dir. Is that what you are looking for? cheers Bruce On Mon, 5 Nov 2018, ece ulug wrote: > > External Email - Use Caution > > Dear Experts, > > > I am very beginner in Freesurfer, and I want to use 'read_annotation' > function but i don't know what is the next step. I added the Matlab > screenshoot. > > > Additionally; 'read_curv' function don't work in Matlab. I added it. > > > Thanks in advance > > Ece > > > >
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