Hi Khoi
I would recommend trying out version 6 and using the bigventricles flag.
It works pretty well
cheers
Bruce
On Thu, 26 Jul 2018, Khoi Mai wrote:
External Email - Use Caution
Hello,
We are trying to run two subjects through recon-all. The kicker is that these
two have very large
ventricles and we have been stuck at mris_fix_topology (the script reports
about 100-ish defects for
each). We use HPC to run the analyses but even with a walltime of 96 hours
each, both subjects were
unable to be finished within that time frame. My question is that is there any
way to improve
mris_fix_topology runtime?
Subject 1:
[IMAGE]
Subject 2:
[IMAGE]
Thank you for your help.
Best,
Khoi
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