External Email - Use Caution Dear Freesurfer experts,
I intended to extract centroid of the atlas "Buckner2011_17Networks_MNI152_FreeSurferConformed1mm_LooseMask.nii.gz" According to the post: https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2018-May/057046.html I used the command as: """ source_img_fname=${FREESURFER_HOME}"/average/Buckner_JNeurophysiol11_MNI152/Buckner2011_17Networks_MNI152_FreeSurferConformed1mm_LooseMask.nii.gz" color_lut=${FREESURFER_HOME}"/average/Buckner_JNeurophysiol11_MNI152/Buckner2011_17Networks_ColorLUT.txt" mri_segcentroids --i ${source_img_fname} --o ./Buckner2011_17Networks_centroid.txt --ctab ${color_lut} """ Am I use it the right way? Also, I am wondering how to transform the volumetric 17Networks centroids to embed to surface-based fsaverage network centroids (scripts as https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2018-February/056056.html) ? Thank you for your time! Best, Foucault
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
