you will also need to recreate lh.MS073_R01_05-t2star_05iso_corr_disco_r0.8_depth0.5_fwhm3.mgh
On 5/21/18 12:45 PM, Barletta, Valeria wrote: > Hi Freesurfers, > I sent this help request some days ago but had some problems in receiving the > reply because of mailing list subscription issues... > Sorry for submitting this request again: > > I used the command mris_preproc to have all the surfaces of my cohort > concatenated in fs average and I obtained this error message from several of > my subjects: > > #@# 3/11 MS073_R01_05/Bay8_3T/fs/MS073_R01_05 Fri May 11 14:24:58 EDT 2018 > -------------- > ----------------------- > mri_surf2surf --srcsubject MS073_R01_05/Bay8_3T/fs/MS073_R01_05 --srchemi lh > --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg > sphere.reg --tval > /autofs/space/alicudi_002/users/mscat/users/valeria/CMEt2star/11Subj/tmp.mris_preproc.10346/MS073_R01_05.Bay8_3T.fs.MS073_R01_05.3.mgh > --sval > /autofs/space/alicudi_002/users/mscat/users/gabriel/R01_Automatic/MS073_R01_05/Bay8_3T/fs/MS073_R01_05/surf/overlay/lh.MS073_R01_05-t2star_05iso_corr_disco_r0.8_depth0.5_fwhm3.mgh > --noreshape --no-cortex > ERROR: dimension inconsistency in source data > Number of surface vertices = 124277 > Number of value vertices = 124470 > Source registration surface changed to sphere.reg > Target registration surface changed to sphere.reg > srcsubject = MS073_R01_05/Bay8_3T/fs/MS073_R01_05 > srcval = > /autofs/space/alicudi_002/users/mscat/users/gabriel/R01_Automatic/MS073_R01_05/Bay8_3T/fs/MS073_R01_05/surf/overlay/lh.MS073_R01_05-t2star_05iso_corr_disco_r0.8_depth0.5_fwhm3.mgh > srctype = > trgsubject = fsaverage > trgval = > /autofs/space/alicudi_002/users/mscat/users/valeria/CMEt2star/11Subj/tmp.mris_preproc.10346/MS073_R01_05.Bay8_3T.fs.MS073_R01_05.3.mgh > trgtype = > srcsurfreg = sphere.reg > trgsurfreg = sphere.reg > srchemi = lh > trghemi = lh > frame = 0 > fwhm-in = 0 > fwhm-out = 0 > label-src = (null) > label-trg = (null) > OKToRevFaceOrder = 1 > Reading source surface reg > /autofs/space/alicudi_002/users/mscat/users/gabriel/R01_Automatic//MS073_R01_05/Bay8_3T/fs/MS073_R01_05/surf/lh.sphere.reg > Loading source data > > > I saw that the problem could be related with the sphere file and I tried > re-running -autorecon2 and -autorecon3 but it did not solve the problem. > Could you please help me out with this? > Thank you, > Valeria > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
