Hi Fereshte, mri_watershed -LABEL inputvolume.mgz outputvolume.mgz
The output volume will contain 6 labels: 0 = exterior 1 = scalp 2 = skull 3 = csf 4 = gray 5 = white 6 = fat tissue Emma > On Oct 11, 2017, at 3:38 AM, Fereshte <fereshte.ramez...@gmail.com> wrote: > > Dear Experts, > How is it possible to extract labels like scalp and skull using -LABEL flag > in mri_watershed ? > Thanks for your attention. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
