mri_cor2label with extract the coordinates into a label file. The coordinates will be in "tkregisterRAS". What coordinate system do you want? See
See https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems On 07/25/2017 07:32 PM, Redwan Maatoug wrote: > Hi experts, > > I just want to know a way to extract the coordinates from a ROI mgh file. > > I know that I can load the file with tksurfer but I have 100 .mgh > files so if I could run a command line to have the coordinates in a > .txt file or in a .m it would be helpful. > > Thank you, > Redwan > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
