Dear Freesurfer experts,
I have T1 and T2 images were unfortunately acquired with different resolution (i.e the voxel sizes is not the same)
T1 is 280X280X208
T2 is 270X270X200
I tried to run "recon-all" but it failed to process the data. The command that I used is :
pbsubmit -c " recon-all -subjid subj1 -T2 PATH_TO_/T2.nii.gz -qcache -T2pial -all"
How can I analyze these images? Is it a correct procedure to conform the voxels using "mri_convert". Is this procedure correct? does it hurt the anatomy of the images?
I highly appreciate your help
John
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