Is ist correct that the pcc.mgh file give's me pearson's correlation coeeficient for each vertex?
Best, Carlos ________________________________ Dr. med. Juan Carlos Baldermann Wissenschaftlicher Mitarbeiter, Assistenzarzt AG Neurobiologie und Neuromodulation psychischer Erkrankungen Klinik für Psychiatrie und Psychotherapie Universitätsklinikum Köln Kerpener Str. 62 D - 50937 Köln Telefon: 0221- 478 86211 Email: juan.balderm...@uk-koeln.de __________________________________________________________________________________________________________ VERTRAULICHKEITSHINWEIS: Diese E-Mail und alle anhängenden Dokumente enthalten Informationen, die ausschließlich für die adressierte Person bestimmt sind. Die Informationen können gemäß den einschlägigen Vorschriften vertraulich und/oder von Veröffentlichungen ausgenommen sein. Das Kopieren und die Weitergabe an nicht autorisierte Dritte sind verboten. Falls Sie nicht der Empfänger sind, benachrichtigen Sie uns bitte umgehend. Danke! CONFIDENTIALITY NOTICE : This email and any documents which may accompany it, contains information, which is intended solely for the use of the individual or entity to which it is addressed, and which may contain information that is privileged, confidential, and/or otherwise exempt from disclosure under applicable law. If the reader of this message is not the intended recipient, any disclosure, dissemination, distribution, copying orother use of this communication or its substance are prohibited. If you have received this communication in error, please contact us immediately. Thank you! ________________________________________ Von: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu]" im Auftrag von "Douglas N Greve [gr...@nmr.mgh.harvard.edu] Gesendet: Montag, 13. März 2017 21:07 An: freesurfer@nmr.mgh.harvard.edu Betreff: Re: [Freesurfer] Qdec effect sizes, correlation coefficient if you use the version 6 of mri_glmfit, it will automatically output the pcc.mgh file. If you want a cohen's D, then you can cd glmdir/contrast fscalc gamma.mgh div ../rstd.mgh -o cohensd.mgh On 03/13/2017 01:45 PM, Juan Baldermann wrote: > Dear all, > > I did a correlation analysis in qdec and now I want to report effect > sizes of my significant clustes. How can I extract a correlation > coefficient for this type of analyis? Or any other effect size? I saw > that i can derive them from the pcc.mgh file, but this somehow didn't > work in matlab...does the gamma.mgh file also have effect sizes per > cluster? > > Kind regards > Carlos > > > ------------------------------------------------------------------------ > Dr. med. Juan Carlos Baldermann > Wissenschaftlicher Mitarbeiter, Assistenzarzt > AG Neurobiologie und Neuromodulation psychischer Erkrankungen > Klinik für Psychiatrie und Psychotherapie > Universitätsklinikum Köln > Kerpener Str. 62 > D - 50937 Köln > Telefon: 0221- 478 86211 > Email: juan.balderm...@uk-koeln.de > __________________________________________________________________________________________________________ > > _VERTRAULICHKEITSHINWEIS: Diese E-Mail und alle anhängenden Dokumente > enthalten Informationen, die ausschließlich für die adressierte Person > bestimmt sind. Die Informationen können gemäß den einschlägigen > Vorschriften vertraulich und/oder von Veröffentlichungen ausgenommen > sein. Das Kopieren und die Weitergabe an nicht autorisierte Dritte > sind verboten. Falls Sie nicht der Empfänger sind, benachrichtigen Sie > uns bitte umgehend. Danke! CONFIDENTIALITY NOTICE : This email and any > documents which may accompany it, contains information, which is > intended solely for the use of the individual or entity to which it is > addressed, and which may contain information that is privileged, > confidential, and/or otherwise exempt from disclosure under applicable > law. If the reader of this message is not the intended recipient, any > disclosure, dissemination, distribution, copying orother use of this > communication or its substance are prohibited. If you have received > this communication in error, please contact us immediately. Thank you! > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. 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