Hi Ferdi, Sorry for the late response. Is this a standard resolution (1mm) T1? I’m very surprised; it’s never required more than 14GB on our data. Cheers, /Eugenio
Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/ On 16 Mar 2017, at 14:02, Ferdi van de Kamp <ferdivdk...@gmail.com<mailto:ferdivdk...@gmail.com>> wrote: Hi all, I believe the website warns for high demands of memory, claiming it may take up to 10G for this processing step. However, when I run this on cluster the memory demands go up to 30G. This is still for one subject using one scan. Is this to be expected, has something changed in the processing pipeline? Eventually I want to run the longitudinal version, should I expect an increase in memory demands? Running the parahippocampal subfields on our cluster using: recon-all -s $subject -hippocampal-subfields-T1 Version: INFO: FreeSurfer build stamps do not match Subject Stamp: freesurfer-Linux-centos6_x86_64-stable-v6-beta-20161028-4cfbf2a Current Stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c Kind regards, Ferdi _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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