Hi Anna yes, if you reduce the number of iterations it will inflate less. For example, from the surf dir:
mris_inflate -n 1 ./lh.smoothwm ./lh.smoothwm.n1 will generate a slightly inflated surface cheers Bruce On Wed, 1 Mar 2017, Crawford, Anna wrote: > > Hi, > > > I am using a volume to create a surface overlay. I am currently overlaying > onto the ?h.inflated volumes created when recon-all is executed. These > volumes are overinflated for what I want. Is there a way I can create a less > inflated, inflated-volume? I was looking at mris_inflate, and was thinking > maybe it had to do with the iteration number. I was not able to get this > command to execute though. Is there a way to do this? > > > Thanks, > > Anna > > =================================== > > Please consider the environment before printing this e-mail > > Cleveland Clinic is ranked as one of the top hospitals in America by > U.S.News & World Report (2015). Visit us online at > http://www.clevelandclinic.org for a complete listing of our services, staff > and locations. Confidentiality Note: This message is intended for use only > by the individual or entity to which it is addressed and may contain > information that is privileged, confidential, and exempt from disclosure > under applicable law. If the reader of this message is not the intended > recipient or the employee or agent responsible for delivering the message to > the intended recipient, you are hereby notified that any dissemination, > distribution or copying of this communication is strictly prohibited. If you > have received this communication in error, please contact the sender > immediately and destroy the material in its entirety, whether electronic or > hard copy. Thank you. > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
