Thanks Doug, I will give it try and update you on it.

S

-- 
Shane Schofield

On 26 February 2017 at 22:35:52, Douglas Greve (gr...@nmr.mgh.harvard.edu) 
wrote:

Probably not. Probably you the cerebellum is still attached. You should check 
the wm.mgz volume.


On 2/24/17 11:21 AM, Shane Schofield wrote:
Hi Freesurfer Team,

I am running recon-all on Freesurfer version 6. A few of my subjects have “XL 
defect detected …” and their recon-all have been running for more than 20 
hours. I hope this is not a silly question, but will this XL defect be 
corrected eventually…? 

Another question, what are “defects”? Is there anything I could do to the raw 
T1 before recon-all?

Thanks!

Shane

-- 
Shane Schofield


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