Hi Doug,
the orig looks fine and we cannot see a file orig.nofix in the subject
dirs. We still use v5.3.
But what we tried now for another similar subject was to remove falsely
labelled white matter in dura which was far away, but that fixed the
white matter errors so far inside the brain. Does that make any sense to
you why that helps?
Cheers,
Mel
On 27-02-2017 5:23, Douglas Greve wrote:
Hi Mel, how does the orig or orig.nofix look?
On 2/24/17 9:21 AM, Melanie Ganz wrote:
Dear list,
we are experiencing a strange wm surface error that we are not quite
sure about how to fix. The errors is at a location where the wm.mgz
look absolutely fine as well as the brainmask.mgz. Also the
intensities in the norm.mgz look fine.
Please find 6 pics showing the error highlighted by the cursor on the
brainmask.mgz and the wm.mgz in all three views.
Cheers,
Mel
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Melanie Ganz-Benjaminsen, MSc, Ph.D.
Neurobiology Research Unit
University of Copenhagen
Rigshospitalet
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