Dear Developers,
I am trying to run the mri_glmfit command and I get two different errors for two different subjects. Please find details below. I would be really grateful if you could provide any advice. Error1 setenv SUBJECTS_DIR ./ mri_glmfit --glmdir ./ --y lh.10.lgi.mgh --fsgd fsgd_test2.txt --no-contrasts-ok --surf subject1 lh gdfReadHeader: reading fsgd_test2.txt INFO: gd2mtx_method is dods Reading source surface .//subject1/surf/lh.white Number of vertices 167703 Number of faces 335402 Total area 108706.031250 AvgVtxArea 0.648206 AvgVtxDist 0.881642 StdVtxDist 0.250483 $Id: mri_glmfit.c,v 1.196.2.8 2012/11/01 18:51:41 greve Exp $ cwd /home/test cmdline mri_glmfit --glmdir ./ --y lh.10.lgi.mgh --fsgd fsgd_test2.txt --no-contrasts-ok --surf subject1 lh sysname Linux hostname machine x86_64 user FixVertexAreaFlag = 1 UseMaskWithSmoothing 1 OneSampleGroupMean 0 y /home/test/lh.10.lgi.mgh logyflag 0 usedti 0 FSGD fsgd_test2.txt labelmask .//subject1ii/label/lh.cortex.label maskinv 0 glmdir ./ IllCondOK 0 ReScaleX 1 DoFFx 0 Creating output directory ./ Loading y from /home/test/lh.10.lgi.mgh INFO: gd2mtx_method is dods Saving design matrix to .//Xg.dat Normalized matrix condition is 1 Matrix condition is 1 Found 158404 points in label. ERROR: mri_reshape: number of elements cannot change nv1 = 167703, nv1 = 163842 Pruning voxels by thr: 0.000000 Found 163842 voxels in mask Saving mask to .//mask.mgh Reshaping mriglm->mask... ERROR: mri_reshape: number of elements cannot change nv1 = 163842, nv1 = 167703 search space = 108705.102552 DOF = 0 ERROR: DOF = 0 Error 2 setenv SUBJECTS_DIR ./ mri_glmfit --glmdir ./ --y lh.10.lgi.mgh --fsgd fsgd_test2.txt --no-contrasts-ok --surf subject2 lh gdfReadHeader: reading fsgd_test2.txt INFO: gd2mtx_method is dods Reading source surface .//subject2/surf/lh.white Number of vertices 129318 Number of faces 258632 Total area 86174.742188 AvgVtxArea 0.666379 AvgVtxDist 0.893985 StdVtxDist 0.260921 $Id: mri_glmfit.c,v 1.196.2.8 2012/11/01 18:51:41 greve Exp $ cwd /home/test cmdline mri_glmfit --glmdir ./ --y lh.10.lgi.mgh --fsgd fsgd_test2.txt --no-contrasts-ok --surf subject2 lh sysname Linux hostname machine x86_64 user FixVertexAreaFlag = 1 UseMaskWithSmoothing 1 OneSampleGroupMean 0 y /home/test/lh.10.lgi.mgh logyflag 0 usedti 0 FSGD fsgd_test2.txt labelmask .//subject2/label/lh.cortex.label maskinv 0 glmdir ./ IllCondOK 0 ReScaleX 1 DoFFx 0 Creating output directory ./ Loading y from /home/test/lh.10.lgi.mgh INFO: gd2mtx_method is dods Saving design matrix to .//Xg.dat Normalized matrix condition is 1 Matrix condition is 1 Found 121215 points in label. ERROR: mri_reshape: number of elements cannot change nv1 = 129318, nv1 = 163842 Pruning voxels by thr: 0.000000 Segmentation fault Bets wishes, Vasiliki
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