Thanks Bruce. -----Original Message----- From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Chris Adamson Sent: Monday, 7 March 2016 1:54 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] T2pial shrinks pial surface
It is checkT2pial.zip -----Original Message----- From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl Sent: Monday, 7 March 2016 1:35 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] T2pial shrinks pial surface https://surfer.nmr.mgh.harvard.edu/fswiki/FtpFileExchange On Mon, 7 Mar 2016, Chris Adamson wrote: > How can I upload it to you? > > -----Original Message----- > From: freesurfer-boun...@nmr.mgh.harvard.edu > [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce > Fischl > Sent: Monday, 7 March 2016 1:25 PM > To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> > Subject: Re: [Freesurfer] T2pial shrinks pial surface > > Hi Chris > > if you upload that dataset I'll try to take a look soon > > cheers > Bruce > > > On Mon, 7 Mar 2016, Chris Adamson wrote: > >> >> The T2pial option mostly works beautifully. I have a few cases where >> the pial surface just shrinks globally and wraps over the white >> surface (see attached). I have checked the T2.mgz and the >> registration with the T1 is fine. This happens sometimes in one hemisphere >> only. >> >> Any ideas? >> >> >> >> [IMAGE] >> >> Chris Adamson >> Senior Research Officer >> Developmental Imaging >> Murdoch Childrens Research Institute >> The Royal Children’s Hospital >> Flemington Rd Parkville, Victoria 3052 AUS >> T: (03) 9936 6780 >> E: chris.adam...@mcri.edu.au >> www.mcri.edu.au >> >> >> >> [IMAGE][IMAGE][IMAGE][IMAGE][IMAGE] >> >> >> >> This e-mail and any attachments to it (the "Communication") are, >> unless otherwise stated, confidential, may contain copyright material >> and is for the use only of the intended recipient. 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For more information please visit http://www.symanteccloud.com If you have any questions, please contact MCRI IT Servicedesk for further assistance. ______________________________________________________________________ ______________________________________________________________________ This email has been scanned by the Symantec Email Security.cloud service. For more information please visit http://www.symanteccloud.com ______________________________________________________________________ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . 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