how different? Eg, what is the size of hippocampus in each?
On 12/23/15 9:28 AM, Bruce Fischl wrote:
Hi Susanne
we will need the full command lines you used and screen output in
order to help you
cheers
Bruce
On Wed, 23 Dec 2015, Schell, Susanne wrote:
Dear colleagues,
We are recently using the freesurfer recon-all command
recon-all –s XXXX –I XXXX.nii.gz
recon-all –s XXXX –all
where XXXX stands for the subject ID. I have been trying to execute this
command with the different input files:
1) original dicom-files
2) nii-file where the field of view was cut, apart from that the
same
file as in 3)
3) nii.gz-file, was computed by mri_convert with the files from 1)
We guessed results should be the same, but unfortunately, the
segmentation
looks slightly different in all three cases.
Maybe you can help us by trying to find out why the output files are
different?
Thanks very much in advance!
Best regards,
Susanne
______________________________________
Susanne Schell, Dipl.-Psych.
Sektion Störungen der Persönlichkeitsentwicklung
Klinik für Kinder- und Jugendpsychiatrie
Universitätsklinikum Heidelberg
Tel: (+49) – (0)6221-56 35135
e-mail: susanne.sch...@med.uni-heidelberg.de
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
