Hi Lena Sure, but you will need to run all your subjects through recon-all first. The if the ROI is in MNI space you can use mri_label2label to map it to our group space fsaverage. Cheers Bruce
> On Sep 4, 2015, at 9:27 AM, Lim, Lena <lena....@kcl.ac.uk> wrote: > > Sorry, I haven’t heard any replies so am re-posting this again for help > please: > > > Dear Experts, > > I have 3 groups: A, PC, HC > > I did a VBM analysis in SPM and found group differences in grey matter volume > in 2 clusters: > 1) Bilateral pre-/SMA, left middle/superior frontal gryi > 2) left inferior/middle temporal/fusiform/inferior/middle occipital > gyri/superior/inferior posterior cerebellar lobe > > Is there any way I can use the SPM images to extract these ROI regions to see > if they differ in cortical thickness and surface area please? > > Many thanks, > > Lena > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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